| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2488 |
|---|
| Symbol | |
|---|
| ID | 8726232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3010338 |
|---|
| End bp | 3011570 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | glucose sorbosone dehydrogenase |
|---|
| Protein accession | YP_003387306 |
|---|
| Protein GI | 284037376 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.583653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.172855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACG TAGTCAAGCC GACTATCTTA TCAGGGCTGA TTACCGCAGG CTTTCTTGTT
TCCTGTAGTA AAGATGAGGT CTTCAATGCC CAGATTCCTG AGACAAACCA GCAACCGACC
ACCGCTCAGG TGAACGGTAA TGTTTTTGAA CCCGCTCTGG TAGCCGCAAC CGATGCGCGA
ATTGCTCAAC TTAAACTCCC GGCGGGTTTT ACTATCGCCA AATTTGCCGA TCAGCTTGGC
AAGCCCCGAA TGCTGACGGT TAGTACAACG GGCAACGTAT ATGTTACCAG CCGCGATGCC
GGGACCGTTA CCTTACTTCG CGATACAAAC AATGATGGCA AATCAGACCA AAGTCAGGTT
GTAGCCAGGA TCAAGGATGT TCACGGCCTG ACAATTTTTT CGGGCAAAAT GTATCTGGTA
GCCATCCACG ATGTGTATTC GGCAGCGATA AACGCAGACG GTACCCTGGG AACTCCCCAA
CAGATTATGA CCGGCCTTCC TGATGCGGGT CAGCACCCAA ACCGTACCAT TGCCTTTGGC
CCCGATGGGT TCATGTACAT CACCGTAGGC AGTACCTGTA ATGCCTGTGC TGACTCAAAC
CCCGAAAGCG CAACCATTCT TCGGGCCAAT CCGGACGGGA CAGGTCGGCG GATTTATGCT
AAAGGGCTGC GCAATACCAT TGGCTTTGGC TGGCATCCAG AAACGAAAGA ACTGTACGGA
TTCGATCATG GCATTGACTG GCTCGGCGAC GAACAGCAGA AGGAAGAATT GAATCTGATC
AAAGACGGGG CTTTTTACGG ATGGCCTTAC ATTTATGGGG ATGGTAACTA CAACCCTCAC
CCGAGGCCCA TGGGCGATAC TACCTACGCC CAGATACTGG CCAAAACGAC TTTACCTTCC
CTACAGTACG ATGCGCACGC AGCTCCGCTG GGCATGGTGT TTTACACAGG AAGTGGCGCA
TCAGGAGGCT TCCCCGCCGA ATACCAGAAC GATGCTTTCG CTACCATGCG TGGCTCCTGG
AACCGTAGTC AGCCTTCAGG TTATAAAGTA GTCCGTGTAC ATTTTGACGC GGGTAAACCC
ACGCGCATTG ATGATCTGGT AACGGGTTTT GTTGTCGATA ACAACCAGGC TCAGTTTGGG
CGGCCCGTGG GTATTGCCAC CATGCCAGAT GGTTCTCTGT TATTTACCGA TGACAACAAC
GGTATCATTT ACCGGGTTAG CTACGCCAAA TGA
|
|---|
| Protein sequence | MKNVVKPTIL SGLITAGFLV SCSKDEVFNA QIPETNQQPT TAQVNGNVFE PALVAATDAR
IAQLKLPAGF TIAKFADQLG KPRMLTVSTT GNVYVTSRDA GTVTLLRDTN NDGKSDQSQV
VARIKDVHGL TIFSGKMYLV AIHDVYSAAI NADGTLGTPQ QIMTGLPDAG QHPNRTIAFG
PDGFMYITVG STCNACADSN PESATILRAN PDGTGRRIYA KGLRNTIGFG WHPETKELYG
FDHGIDWLGD EQQKEELNLI KDGAFYGWPY IYGDGNYNPH PRPMGDTTYA QILAKTTLPS
LQYDAHAAPL GMVFYTGSGA SGGFPAEYQN DAFATMRGSW NRSQPSGYKV VRVHFDAGKP
TRIDDLVTGF VVDNNQAQFG RPVGIATMPD GSLLFTDDNN GIIYRVSYAK
|
|---|
| |