Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2487 |
Symbol | |
ID | 8726231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3009253 |
End bp | 3009996 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | protein of unknown function DUF892 |
Protein accession | YP_003387305 |
Protein GI | 284037375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.48482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.272149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCTC TAGGAAGTCA AATCGCAAAT TTCTTTAGTG GTAATGACAA CGATACGCGT GAAGGACTGC AGAGCCTTTT CGTTAGTGAA TTGAAAGGAA TTTATTACGC TGAAAAGCAA GCCGTAGACG CCCTTGGCGA GCAGGCAGAT GCCTCTACTA CCGACGAAGT GAGGAACGCT TTTCTACAAC ATCAGGAAGA AACCCGTGGG CAAGTAGCTC GTCTGGAGGA TGTATTTCGT AGCATTGGCG TTGAAGTAGA TGACAAAACC TGTGCAGCTA TCGACGGTCT GGTCGACGAC GCCCAGATGG TCGTCTCCGA AACCGAATCG GGCTCTTTAA CCCGTGATGC CGGATTGATT ATAGCCGGAC AGAAAATCGA GCACCATGAA ATTGCCGCTT ACGGATCAGC CGTAACGCTG GCTAGCGTGC TGGGTTATTC GGATGCTGCC CGTATGTTGC AGCAAACGCT GGAAGAAGAA AAAAATACTG ATAGAAAGCT GACCCAATTA GCCGAATCGT TTATCAACCA GCGGGCTGCT TCGGAAGATG ATAACTCGTC GTCTGGATCC AGCCAGTATG GTACTCAAGG TCAATATAGC GGTAGCCAAT ATGCCGGTAC CAGTAGCAGT ACAGACCAGT ATGGATCGGT GAATCCCGAT GGAAGCCGCT ATGGAGATAG CTCGTCGACA ACGGGTTACA ACACCGGTGG CAGTTCGTCT ACGAGTGGTT CCGGCTTAAT CTAA
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Protein sequence | MASLGSQIAN FFSGNDNDTR EGLQSLFVSE LKGIYYAEKQ AVDALGEQAD ASTTDEVRNA FLQHQEETRG QVARLEDVFR SIGVEVDDKT CAAIDGLVDD AQMVVSETES GSLTRDAGLI IAGQKIEHHE IAAYGSAVTL ASVLGYSDAA RMLQQTLEEE KNTDRKLTQL AESFINQRAA SEDDNSSSGS SQYGTQGQYS GSQYAGTSSS TDQYGSVNPD GSRYGDSSST TGYNTGGSSS TSGSGLI
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