Gene Slin_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2487 
Symbol 
ID8726231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3009253 
End bp3009996 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF892 
Protein accessionYP_003387305 
Protein GI284037375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.48482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.272149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTC TAGGAAGTCA AATCGCAAAT TTCTTTAGTG GTAATGACAA CGATACGCGT 
GAAGGACTGC AGAGCCTTTT CGTTAGTGAA TTGAAAGGAA TTTATTACGC TGAAAAGCAA
GCCGTAGACG CCCTTGGCGA GCAGGCAGAT GCCTCTACTA CCGACGAAGT GAGGAACGCT
TTTCTACAAC ATCAGGAAGA AACCCGTGGG CAAGTAGCTC GTCTGGAGGA TGTATTTCGT
AGCATTGGCG TTGAAGTAGA TGACAAAACC TGTGCAGCTA TCGACGGTCT GGTCGACGAC
GCCCAGATGG TCGTCTCCGA AACCGAATCG GGCTCTTTAA CCCGTGATGC CGGATTGATT
ATAGCCGGAC AGAAAATCGA GCACCATGAA ATTGCCGCTT ACGGATCAGC CGTAACGCTG
GCTAGCGTGC TGGGTTATTC GGATGCTGCC CGTATGTTGC AGCAAACGCT GGAAGAAGAA
AAAAATACTG ATAGAAAGCT GACCCAATTA GCCGAATCGT TTATCAACCA GCGGGCTGCT
TCGGAAGATG ATAACTCGTC GTCTGGATCC AGCCAGTATG GTACTCAAGG TCAATATAGC
GGTAGCCAAT ATGCCGGTAC CAGTAGCAGT ACAGACCAGT ATGGATCGGT GAATCCCGAT
GGAAGCCGCT ATGGAGATAG CTCGTCGACA ACGGGTTACA ACACCGGTGG CAGTTCGTCT
ACGAGTGGTT CCGGCTTAAT CTAA
 
Protein sequence
MASLGSQIAN FFSGNDNDTR EGLQSLFVSE LKGIYYAEKQ AVDALGEQAD ASTTDEVRNA 
FLQHQEETRG QVARLEDVFR SIGVEVDDKT CAAIDGLVDD AQMVVSETES GSLTRDAGLI
IAGQKIEHHE IAAYGSAVTL ASVLGYSDAA RMLQQTLEEE KNTDRKLTQL AESFINQRAA
SEDDNSSSGS SQYGTQGQYS GSQYAGTSSS TDQYGSVNPD GSRYGDSSST TGYNTGGSSS
TSGSGLI