Gene Slin_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2477 
Symbol 
ID8726221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3000063 
End bp3002171 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content51% 
IMG OID 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_003387295 
Protein GI284037365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0415356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.385274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC GAGCTACTTT TTTTGATACT CCGCTTGCCT ATCTCAAAGG TTTGGGACCG 
CAGCGTACGG AACTGCTCAA CAAAGAGTTG AATTTGTTTA CGTACGGTGA CCTGATTCAG
TATTATCCAT TTCGATACGA TGACCGGTCG CGGTACTATA CCATCAGTGA GTTGATGGAT
TCTATGCCCT CCGCCCAAAT TCGCGGGCGG CTGCGCGATT GGTACCTGGA AGGCGAAGGC
CCTAAAAAGA GGCTGGTCGC TACCTTTTCC GATGGCACTG GTTCCATGAG TCTTGTCTGG
TTTCAGGGGA TTACCTTTAT CGAGAAAACC CTCCGCCGGG AAGGTGAATA CATCGCCTAT
GGCAAACCGC AGTCGTTTAA CGGGCAGTTT AGCATTGTGC ATCCGGAGCT GGAAAATGCC
AATGCGGCCT CGGAAAATGA ACCGGGCTTC TTTCCGGTTT ACAACTTAAC GGATAAGCTT
CGCAAGCGAC ACCTCGATAG TAAAGTATTG GGTAAGGCCA TGCGTGTTCT GCTGGAGCAG
TCCTGGACAC ACATTCGCGA AACCCTGCCC GACTCACTTA TTCAGCAGTA CCGGCTCATT
GGCAAACGGG AGGCTATGTG GAATATCCAC CTGCCGCAGA ACCAGGGTTG GCTAAAGCAG
GCGCAACGCC GGTTGAAATT TGAAGAACTG TTCTACAACC AGCTACGGCT GATTAAAAAT
AAACTCCTTC AAAAAGAGGA ATTTCCGGGT CAGGTTTTTC GGGATACCTC CCTCATGAAG
CATTTCTACA ATGAACTGCT GCCCTTTGAA CTGACGGGAG CGCAGCAGCG CGTCATTAAA
GAAATCTACG CCGACTTCCT GAGCGGCAAG CAAATGAACC GGTTGTTGCA GGGCGATGTG
GGCAGCGGAA AGACTATAGT CGCGTTTATC ACCTGCTTGA TCGCGATTGG GAATGGGGCA
CAGGCCTGCC TGATGGCTCC TACGGAAATT CTGGCCGACC AGCACTATAA TGGCCTGAAA
CCCTTTGCCG ATGCCATGGG CCTGAACCTG GGAATTTTGA CCGGTTCGAC AAACAAAAAA
CGACGGGTGG TGCTCCACGA AGAATTGCAA TCGGGGAAAA TGCACATTCT GGTAGGCACC
CACGCACTGC TTGAGGATGC CGTTCAGTAT AAAAACCTCG GCCTATGCAT CATTGACGAG
CAGCACCGGT TTGGCGTGGC TCAACGCGCT AAACTGTGGC GTAAAAACGA AACGGTGCCG
CCCCATATTC TAGTCATGAC GGCAACACCC ATTCCGCGTA CGCTGGCTAT GACGCTGTAC
GGTAATCTCG ACGTATCTAC CATCGACGAG TTACCCAAAG GCCGGAAACC CATCAAAACG
GTTCATAAGT ACGACAAACA TCGTTCGGAA GTATTCGGGT TTATCCGGCA GCAAATTGAA
CTGGGTCGGC AGGTGTACGT AGTGTATCCT CTGATCGAAG AATCGGAAAA GCTGGATTAT
AAGGATTTGA TGGATGGATT CGAGAGCATG CAGCGGGCGT TTCCCCGACC AACGTACGAA
ATCGGTATGC TGCATGGCAA AATGCTTCCG TATGAGAAAG ACGATGAAAT GAAGCGGTTT
CTGAAGAAAG AGACCCAAAT TTTGGTAGCC ACAACGGTTA TTGAAGTTGG CGTAAACGTG
CCAAACGCCA GCGTGATGGT CATTGAAAGT GCCGAGCGGT TCGGCTTGTC ACAGCTTCAC
CAGCTACGGG GTAGGGTAGG CCGGGGAGCC GACCAGTCCT ATTGTATCAT GATGACTGGA
TATAAATTAA GCACCGACAC CCGCACCCGG CTCGAAACGA TGGTGCGAAC CAACAACGGA
TTCGAGATTG CCGATGTGGA TTTGCAGTTA CGTGGACCCG GCGATTTAAC AGGTACACAA
CAAAGTGGTG TGATGGACCT GATGATTGCC GATCTCGCCA AAGACGGAGC GATTTTATCG
GCCGCCCGCG AGTCGGCTCA GGCCATTTTA GCTGAGGATC CGGAGCTCCT TTTACCCCAA
CATGCACCTA TTCGCAATCA TGTCGACTCC ATCAAACAGT CGGAGAACAA TTGGGGTCGA
ATTTCATAG
 
Protein sequence
MTERATFFDT PLAYLKGLGP QRTELLNKEL NLFTYGDLIQ YYPFRYDDRS RYYTISELMD 
SMPSAQIRGR LRDWYLEGEG PKKRLVATFS DGTGSMSLVW FQGITFIEKT LRREGEYIAY
GKPQSFNGQF SIVHPELENA NAASENEPGF FPVYNLTDKL RKRHLDSKVL GKAMRVLLEQ
SWTHIRETLP DSLIQQYRLI GKREAMWNIH LPQNQGWLKQ AQRRLKFEEL FYNQLRLIKN
KLLQKEEFPG QVFRDTSLMK HFYNELLPFE LTGAQQRVIK EIYADFLSGK QMNRLLQGDV
GSGKTIVAFI TCLIAIGNGA QACLMAPTEI LADQHYNGLK PFADAMGLNL GILTGSTNKK
RRVVLHEELQ SGKMHILVGT HALLEDAVQY KNLGLCIIDE QHRFGVAQRA KLWRKNETVP
PHILVMTATP IPRTLAMTLY GNLDVSTIDE LPKGRKPIKT VHKYDKHRSE VFGFIRQQIE
LGRQVYVVYP LIEESEKLDY KDLMDGFESM QRAFPRPTYE IGMLHGKMLP YEKDDEMKRF
LKKETQILVA TTVIEVGVNV PNASVMVIES AERFGLSQLH QLRGRVGRGA DQSYCIMMTG
YKLSTDTRTR LETMVRTNNG FEIADVDLQL RGPGDLTGTQ QSGVMDLMIA DLAKDGAILS
AARESAQAIL AEDPELLLPQ HAPIRNHVDS IKQSENNWGR IS