Gene Slin_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2467 
Symbol 
ID8726211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2978879 
End bp2979742 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content54% 
IMG OID 
ProductNmrA family protein 
Protein accessionYP_003387285 
Protein GI284037355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.311321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTAG TAACCGGAGC CACCGGCCAA CTGGGCACCG CCGTTATTCG GCAGCTCCTA 
CAAAAAGTAC CGGCCAGCCA GATTGTTGCC CTGGTACGGG ACGAACAAAA AGCCTCTAAC
CTGATCAACC AGGGGGTAAC CATACGCATG GGCACCTACG ACGATACCGA GGCCCTCGGC
CAAGCAATGC AGGGTATTGA AACCCTCCTG CTGATTGCCG GTACAGACGA GCAAAACCGG
GTTCGCCAGC ACCAGAACGT CGTAGATGCG GCACGGAAAG CATCCGTTCA ACGGATTGCC
TACACGAGCC GGGCGCTCAA GGAGCCTGCT ACACTGGTCA ATCAGCTGAT GATGGGCCAC
TTTCAGACTG AAGACTACAT CAAAGCAAGC GGACTTGCCT ACACGCTGTT TCAGAACATT
CTATATATGG ATGCCATCCC ACAATTTGTG GGCGGTGACG CCGTTTTCGA GCGGGGTATC
TATCTACCAG CCGCGCAGGG CAGGGTTGCC TTCGCCCTAC GAAACGAGAT GGGCGAAGCC
ATCGCGAATG CCCTAGCGGG TAAGTCCGAA GGCAACATCA CCTACCGGTT AACGGGTGGT
GAGTCTTACT CTTTCCATGA CGTAGCCGCT GCTCTAACTA CGCTATCTGG CAAGCCAGTC
GCTTATACCA CGGCAGAGCC ACTCACGTTC GAAACACAAC TCACCGAACG CGGTTTACCC
ACTGTTGTAG CCCAACGAAT CACCAGATTT ATTACCGACA TCGCTCATGG GCAGGAAGAT
AGCGTAAGCC CTGACCTGGA AAAACTACTT GGTCGCAAGC CAATGGCACT TAACGAAGGA
TTAGCGTTGT TGTATCCGCT GTAA
 
Protein sequence
MILVTGATGQ LGTAVIRQLL QKVPASQIVA LVRDEQKASN LINQGVTIRM GTYDDTEALG 
QAMQGIETLL LIAGTDEQNR VRQHQNVVDA ARKASVQRIA YTSRALKEPA TLVNQLMMGH
FQTEDYIKAS GLAYTLFQNI LYMDAIPQFV GGDAVFERGI YLPAAQGRVA FALRNEMGEA
IANALAGKSE GNITYRLTGG ESYSFHDVAA ALTTLSGKPV AYTTAEPLTF ETQLTERGLP
TVVAQRITRF ITDIAHGQED SVSPDLEKLL GRKPMALNEG LALLYPL