| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2453 |
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| Symbol | |
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| ID | 8726197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2959182 |
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| End bp | 2960804 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003387272 |
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| Protein GI | 284037342 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00111761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.539083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA GTTTTAAATA TATAATTATT GCCCTTGGTA TGGCTATGGG CTTACCCGCC
TGTGAGGTAG AACGCCTGCC CGAAACGTCA ATCAGCGACC AGACTTTCTG GCGCTCGGAA
GGCGACCTGA AAGCCGCAGC CAATTACTTG TATACCTTCC TGCCCGGCTG GTCGACAGAT
GATGTCTGGT CGGATGATGC CATTGGGCTG GCATCTAACA GCATCAGTGA CGGCTCCCGG
CTGGCCCCGG CCACCGATGG AAATTACAAC AATAACTACA ACCTGATCCG GGCGGCCAAC
AACATCGTCG AGAAAGCACC CCGCGCATCT GGAAATGCAT CGCAAACGGT TATTGACCGG
TATTCAGCCG AGGCTCGTTT CTTCAGAGCA TGGGGTTATT TTGCGCTGGT ACAGCGTTAC
GGTGAAGTTC CCCTTATTCT GAAAACACTC GACGAGTCGT CGGCTGAACT AACCGCCCCG
GCTAGTCCGC GCGAAGCCAT CTTCGATCAG ATTTATCAGG ATCTTGACTT TGCTGCCCAA
AAACTGCCGA CTCACACAAC ACTGGGAACG GCTGATTTTG GCCGTATCAG CAATACCACC
GCGCTGGCAT TTAAGGCACG AGTTGCCCTG TTTGAAGGAA CGCGGGCTAA ATTTCATGCT
TATGGCGATC CGACCAAACA CCTAAAAGCG GCTGCGGATG CCGCCAAGGC GGTAATTGAC
AGCAAGCAGC ACAACCTGTA TACAGGGCAG TATTTCGATC TGTTTCAAAT GCCGGGAGAA
GGGCGCCAGA ATCCTGAGAA TATTCTGGTG AAGCAATTTG GCGTATCACT GACGGAGCGT
GTTATTACCC ATTCCTACTA CCGGGGATCA CTCGAAAACG GGAATATGAA CCCGACAAAA
AGTCTGGCCG ATTCGTACTT GATGAAAGAT GGATTGCCCA TCACCAAATC GCCCCTGTAC
AAAGCACCGG TTGCGTCGGT CGATGTGTTC CGTGACCGCG ACACCCGGAT GAGTGATACG
TTCATGAAGC GCGGTGATCC GATGATGACC ACCAAACCCA TTTTTGATAT TGCGCCACTG
GTGTTCAATA AAACGGGGTT TATGTTCCGT AAAACGGCTA ACATCGACGA CTGGAATACG
CAGGCCTCAA CCATCGACCG GCCCATCATT CGGTATGCCG AAGTACTGGT AACCTACGCC
GAATCCCTCT TTGAACTGAA TGGGACGATT AGTGACGCCG ACCTCGACCT GACCGTCAAC
CGGCTGCGGC AGCGGGGTGG TGTGGCAAAA CTGACCAACG CATTCGTAAC AGCAAATGAC
CTGACCATGC GCGACGAAAT CCGGCGGGAA CGTCGGGTTG AACTGGCGCA GGAGGGATTC
CGGTATTGGG ACCTGATCCG CTGGAAAACG GCTGAAGTTG AACTGCCCAA ACCTGTACTG
GGAAATTTCT TTTTCAAAAC GGAGTTTGGT ACGGTAGCCG CTGTCCGGCT CACCGCCGAC
AACTACATTC TGGTTCAGGA CGCCAGTTTC CGTAAGTTCG ATGCCAAGAA GGATTATCTG
TGGCCATTGC CCATTAACGA AATAGCCCTG AATCCGTCCC TGAAACAGAA TCCGGGCTGG
TAA
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| Protein sequence | MKKSFKYIII ALGMAMGLPA CEVERLPETS ISDQTFWRSE GDLKAAANYL YTFLPGWSTD
DVWSDDAIGL ASNSISDGSR LAPATDGNYN NNYNLIRAAN NIVEKAPRAS GNASQTVIDR
YSAEARFFRA WGYFALVQRY GEVPLILKTL DESSAELTAP ASPREAIFDQ IYQDLDFAAQ
KLPTHTTLGT ADFGRISNTT ALAFKARVAL FEGTRAKFHA YGDPTKHLKA AADAAKAVID
SKQHNLYTGQ YFDLFQMPGE GRQNPENILV KQFGVSLTER VITHSYYRGS LENGNMNPTK
SLADSYLMKD GLPITKSPLY KAPVASVDVF RDRDTRMSDT FMKRGDPMMT TKPIFDIAPL
VFNKTGFMFR KTANIDDWNT QASTIDRPII RYAEVLVTYA ESLFELNGTI SDADLDLTVN
RLRQRGGVAK LTNAFVTAND LTMRDEIRRE RRVELAQEGF RYWDLIRWKT AEVELPKPVL
GNFFFKTEFG TVAAVRLTAD NYILVQDASF RKFDAKKDYL WPLPINEIAL NPSLKQNPGW
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