Gene Slin_2444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2444 
Symbol 
ID8726188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2947379 
End bp2948194 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content50% 
IMG OID 
ProductIon transport protein 
Protein accessionYP_003387263 
Protein GI284037333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCC GATGGCAACG TTTTCGGCAC AGACTGCACG AGATAATCTT CGAAGCCGAT 
ACCTGGGCTG GCCGGGCTTT CGACATTACG CTGCTTTTTT TGATAATGCT GAGTGTACTC
GCTGTTATTC TGGAGAGCAT TCCCTCTCTG GCCCGTTCGT ATGGGGAATA CTTCGATAGC
ATAGAGTGGC TTTTCACCGG CCTGTTTACC GTTGAGTACC TGCTCCGTAT CATCAGTATC
CGTCAGCCCC TGCGCTACAT GACCAGCTTT TTCGGGCTCG TCGATTTACT GGCTATTTTA
CCGAGTTACC TTGGCTTGTT TTTATTTGGG GCGCATGAGC TGGCGGCCGT CCGTATTCTC
AGGCTGCTCC GTATTTTTCG AATCCTGAAA CTGGGCGAAT ACACCTCAGC CGCGTCAATA
CTCGCCTATT CATTACGCGA AAGCCGGGCC AAAATTACCG TCTTCTTCGT CGCCATTTTT
ACGTTAGTTG TTACACTTGG CTCTATGATG TATGTAGTAG AAGGGCACGC CAACGGCTTT
GAGAGCATAC CACTGAGTAT CTATTGGGCG GTTATTACGA TAACCACTGT CGGCTACGGC
GATATTGTAC CGAGCACCGC TATGGGCAAA TTCATCGCTA CCATTATCAT GCTACTCGGG
TATGTCATTA TCGCGGTACC AACCGGTATC GTAGCGGTCA GTTTAACCAC AGCTAACAAA
AAGCACGAGA TTTCAACCCA GGCTTGTCCA AATTGCGGAC GGCAGGGCCA TGATCCCGAT
GCGGTTCATT GCAAATACTG TGGAGCTGCC CTGTAA
 
Protein sequence
MESRWQRFRH RLHEIIFEAD TWAGRAFDIT LLFLIMLSVL AVILESIPSL ARSYGEYFDS 
IEWLFTGLFT VEYLLRIISI RQPLRYMTSF FGLVDLLAIL PSYLGLFLFG AHELAAVRIL
RLLRIFRILK LGEYTSAASI LAYSLRESRA KITVFFVAIF TLVVTLGSMM YVVEGHANGF
ESIPLSIYWA VITITTVGYG DIVPSTAMGK FIATIIMLLG YVIIAVPTGI VAVSLTTANK
KHEISTQACP NCGRQGHDPD AVHCKYCGAA L