Gene Slin_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2443 
Symbol 
ID8726187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2946213 
End bp2947295 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content53% 
IMG OID 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003387262 
Protein GI284037332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCAC TCCCCATTTT CCTCGCCCTC GCTTCCGGCT TTGTGGTCGT TGGTGTTTAC 
ACCGAACGAA AGGTTTCTGC ATTCATGCAG GACAGGCTTG GTCCGATGGA AACGGGAAAA
TGGGGATTGC TTCAGCTTTT CGCCGACTTA CTCAAACTCC TTCAGAAAGA AGATATTGTG
CCCACAGCGG CCGACCGACG GCTTTTTCTG CTGGCTCCAG CCATTATTTT CGCTTCGGTC
TTTGCGGGAT TTGCGGTACT TCCCCTGTCG CCGGATTTAC AGGGTTCCGG GGCATCCGTT
GGCGTTTTTT ACCTGATGGC CATTGTTTCT TTCGACGTGG TCGGTATCCT GATGGCGGGC
TGGGGGTCCA ATAACAAGTA CTCGCTGTTT GGTGCTATGC GGTCAGTAGC ACAGATTATT
TCTTACGAAA TTCCGCTAGG GCTTACTATT CTGTGCGTGG TCATGATCTG CCAGACGCTC
AACCTACAGA CGTTAAGCTT CCAGCAGGGC ATTTACACCC ACGAAACAAA CTACCTTTTC
GGCTTAAAAG CGTTGGGCAT CGACGTTACT GGCTGGGGGG GTATCTTCTC CTGGAACATC
CTTCGGAACC CCTTTTTACT CATTGCCTAC GTCATCTTTT TCATTTGTAC ACTAGCCGAA
AGCAACCGGG CGCCCTTCGA CCTGCCCGAG GGCGAATCGG AAATCGTGGC CGGCTTTCAT
ACCGAATATT CGGGGATGCG CTTTGCCCTG CTCTACCTGT CTGAGTACGC CATGATGCTG
CTGGTCTCTT TTCTGGGAGC CGTCCTGTTT CTGGGAAGCT GGAATACGCC CCTGCCCAAC
ATCGGGCCGG TCAGACTAGC CGACTGGACG AGCGGAGCAC CCGGCACACT TTGGGGTAAT
CTGACAGGCG GGTTCTGGCT GCTTTCCAAA GTGTTTCTTG CGGTATTGCT GCAAATGTGG
GTTCGTTGGA CATTTCCCCG CGTTCGGGTC GATCAAATGA TGTATTTATG CTGGAAAGTA
CTGACACCGG TTGGTCTGGT TCTCTTGCTG ATATCAGGAA TCTGGCGGTT GCTGATGGTG
TAA
 
Protein sequence
MLALPIFLAL ASGFVVVGVY TERKVSAFMQ DRLGPMETGK WGLLQLFADL LKLLQKEDIV 
PTAADRRLFL LAPAIIFASV FAGFAVLPLS PDLQGSGASV GVFYLMAIVS FDVVGILMAG
WGSNNKYSLF GAMRSVAQII SYEIPLGLTI LCVVMICQTL NLQTLSFQQG IYTHETNYLF
GLKALGIDVT GWGGIFSWNI LRNPFLLIAY VIFFICTLAE SNRAPFDLPE GESEIVAGFH
TEYSGMRFAL LYLSEYAMML LVSFLGAVLF LGSWNTPLPN IGPVRLADWT SGAPGTLWGN
LTGGFWLLSK VFLAVLLQMW VRWTFPRVRV DQMMYLCWKV LTPVGLVLLL ISGIWRLLMV