Gene Slin_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2442 
Symbol 
ID8726186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2944701 
End bp2946140 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content52% 
IMG OID 
Productasparaginyl-tRNA synthetase 
Protein accessionYP_003387261 
Protein GI284037331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AATCCATTCA ACAGTTATTA AAAACCGCCC CAACTGGCAC AGAAGTGACC 
GTTAAGGGGT GGGTACGTAC CAAGCGGGAA AGTAAAAACG CAGTCTTTAT TGCCCTTAAT
GATGGCTCTA CCATCAATAC CATTCAGGCG GTGGCCGAAG CGGGTCAACT TCCCGAAGAA
ACCCTGAAAC TCATCACGAC CGGTGCTTGC CTGGCCGTTA CGGGTCAGTT AGTAGAATCG
CAGGGAGCCG GACAGGCGGT TGAGGTTAAA ATTGCCAACG TAACTATTTA CGGCACCGCC
GACCCCGATA AATATCCGCT GCAACCGAAA CGGCACTCGC TGGAGTTCCT GCGCGAAATT
GCCCACCTGC GGCCCCGTAC CAATACATTC AGCGCTATAT TACGCATCCG GCATGCCCTG
GCCTTCGCCG TCCATAAATA CTTCAACGAC AATGGGTTCT ATTATTTAAA CACCCCCATC
ATTACGGCTT CCGATGCCGA AGGAGCCGGT GAAATGTTCC GGGTGACAAC CCTCGACGCG
ACGAAGCCTC CTTTAACCGA AGACGGTAAG GTCGATTATA GCCAGGACTT CTTTGGCCGC
GAAACCAACC TGACGGTATC CGGTCAGTTG GAAGGTGAAC TGGGCGCAAT GGCACTGGGT
AAAATTTATA CGTTTGGCCC CACGTTCCGG GCCGAAAACT CCAACACCAC CCGCCACCTT
GCCGAGTTCT GGATGATTGA GCCCGAAATG GCCTTTTATG AACTGGAAGA CAACATGAAT
CTGGCCGAGG ATTTTGTCAA AACCGTTATC CGGTACGCGC TGCAACACTG CGCCGACGAC
CTTGCCTTCC TGGATTCGCG GTTGAAAGAT GAAGAGAAGA CCAAAAAGAA AGAAGAACAA
AGTGAACTAG GCTTACTCGA AAAACTTCAG TTTGTGATCA GCAACGAATT TGTTCGGCTG
ACGTATACCG AAGCCATCGA CATTCTGGTG AATTCCAAAC CGGCGAAGAA AGGTCAGTTC
CAGTACGAAG TAAGCTGGGG CGTCGATCTG CAGTCAGAGC ATGAGCGGTA TCTGGTAGAA
AAGCATTTCA AGAAACCGGT GATCCTGACC AACTACCCCC GCGAAATCAA AGCGTTTTAC
ATGAAGCAAG ATCCGGATGG TAAAACTGTG CGGGCCATGG ACGTTCTGTT TCCGGGAATC
GGCGAAATCA TTGGTGGTTC CCAGCGTGAG GACGACCTCG ACAAGCTCAC CGCCCGAATG
CAGGAAGTAG GCATTGAACC CGAAGCGTTA TGGTGGTATC TGGATACGCG CCGATTCGGT
TCGGCACCCC ACGCCGGCTT TGGCCTCGGC TTCGAGCGGC TGGTGTTGTT CGTAACGGGT
ATGGGCAACA TCCGCGATGT GATCCCCTTC CCGCGTGCTC CGAAAACGGC TGAATTTTAG
 
Protein sequence
MSYQSIQQLL KTAPTGTEVT VKGWVRTKRE SKNAVFIALN DGSTINTIQA VAEAGQLPEE 
TLKLITTGAC LAVTGQLVES QGAGQAVEVK IANVTIYGTA DPDKYPLQPK RHSLEFLREI
AHLRPRTNTF SAILRIRHAL AFAVHKYFND NGFYYLNTPI ITASDAEGAG EMFRVTTLDA
TKPPLTEDGK VDYSQDFFGR ETNLTVSGQL EGELGAMALG KIYTFGPTFR AENSNTTRHL
AEFWMIEPEM AFYELEDNMN LAEDFVKTVI RYALQHCADD LAFLDSRLKD EEKTKKKEEQ
SELGLLEKLQ FVISNEFVRL TYTEAIDILV NSKPAKKGQF QYEVSWGVDL QSEHERYLVE
KHFKKPVILT NYPREIKAFY MKQDPDGKTV RAMDVLFPGI GEIIGGSQRE DDLDKLTARM
QEVGIEPEAL WWYLDTRRFG SAPHAGFGLG FERLVLFVTG MGNIRDVIPF PRAPKTAEF