Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2436 |
Symbol | |
ID | 8726180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2940535 |
End bp | 2941452 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | tyrosine recombinase XerD |
Protein accession | YP_003387255 |
Protein GI | 284037325 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.578966 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCAAA GTTATATAAA CGCCTTTAAG AACTACCTCA AACTAGAACG GTCGCTGGCC GAAAATTCGG TGGAGGCCTA CCTGCACGAT GCCGAAAAAC TGTACGAATA CATACTCCTG ACCGACCCCG CCCGGACGCC CATGCAGGTT ACGGAGAAAG AATTGATGAA CTTCCTGAAA TATTTGGGGG AATTGGGTTT ATCGGCGCAC AGCCAGGCCC GGATGCTGTC CGGCATAAAG TCGTTTTTCA AGTACTTGCT GCTTGAAGGA TTAATTGAGC GTGACCCTAC ACAGTTACTG GAATCGCCTA AACTGGGCCG AAAACTCCCT GATACGCTTA GTTTTCCCGA AATTGAAGAC ATGCTTGCCG CCATCGACCT TTCGACGCCC GGTGGCACCC GCGACCGGGC CATGCTGGAA GTCCTCTATA GTTCGGGACT GCGCGTGTCT GAACTGTTGA ACTTGCGTTT GACAAACTGT TTTTTTACCG AAGGTTTTGT GCGCGTTCTG GGGAAAGGCG ATAAAGTACG GCTCGTGCCA ATTGGCGAAG ATGCCATGCA TTACACCCGT ATTTATGTTG AACACGTTCG GCAAAAACTC GATGTGCAAA AAGGCGATGA GGATACTATT TTTCTCAACC TGCGCGGCAA ACAGCTTTCA CGAATTTCGG TCTTTACAAC CATTAAAAAA CTGGCCTCTG AAGTGGGCAT CAAAAAAACG ATTAGTCCCC ACACCTTCCG TCATTCGTTC GCAACGCACC TCATCGAAGG GGGTGCTGAT TTACGGGCCG TCCAGCAAAT GCTTGGCCAT GAATCCATTA CCACGACCGA AATCTACACC CACCTGGATC GGGATTATTT ACAGCAAACC CTGAAAGAGT ATCATCCCAG GGCAAAGGGA CAGCGGGTGC AGCAGTAA
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Protein sequence | MWQSYINAFK NYLKLERSLA ENSVEAYLHD AEKLYEYILL TDPARTPMQV TEKELMNFLK YLGELGLSAH SQARMLSGIK SFFKYLLLEG LIERDPTQLL ESPKLGRKLP DTLSFPEIED MLAAIDLSTP GGTRDRAMLE VLYSSGLRVS ELLNLRLTNC FFTEGFVRVL GKGDKVRLVP IGEDAMHYTR IYVEHVRQKL DVQKGDEDTI FLNLRGKQLS RISVFTTIKK LASEVGIKKT ISPHTFRHSF ATHLIEGGAD LRAVQQMLGH ESITTTEIYT HLDRDYLQQT LKEYHPRAKG QRVQQ
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