| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2426 |
|---|
| Symbol | |
|---|
| ID | 8726170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2929871 |
|---|
| End bp | 2930368 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2166 |
|---|
| Protein accession | YP_003387245 |
|---|
| Protein GI | 284037315 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.536876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.631331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTACGC CTAACCACCA GACTATGCAA CAACCGGACT CATTGAACCA GGTGGCGGAG
TTTCACCGCA CCTTTCATGC CCCTATTTTA GAAACCCCCC AAATTCCATC CGAAGCACGT
AGTCAACTGC GGGTTTCGCT GCTTGCCGAA GAACTCGATG AACTTCGTGA GGCCATTGCC
GAAGGCGATA TTGTAGCCGT AGCCGATGCC CTTTGCGATT TGCAGTATGT TTTGTCGGGT
GCGGTCCTTG AATTTGGTCT CGGCGATTCG TTCAAAGCCT TATTCGACGA AGTACAACGG
TCGAACATGA GCAAAGCCTG CCTGACCGTT GAGGAGGCCG AAGCCACCGT GGCCCAGTAT
CAGGCCAAAG GAGTGCCTTG CCATTACATC GAATCGGAAG GCAAATACCT GGTTTACCGC
GACGCTGACC GTAAAACGCT CAAGAGTGTA AATTACTCTC CCGCCGATCT GGAAGGCATA
CTGCAAAACG TTCAGTAA
|
|---|
| Protein sequence | MLTPNHQTMQ QPDSLNQVAE FHRTFHAPIL ETPQIPSEAR SQLRVSLLAE ELDELREAIA
EGDIVAVADA LCDLQYVLSG AVLEFGLGDS FKALFDEVQR SNMSKACLTV EEAEATVAQY
QAKGVPCHYI ESEGKYLVYR DADRKTLKSV NYSPADLEGI LQNVQ
|
|---|
| |