| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2425 |
|---|
| Symbol | |
|---|
| ID | 8726169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2928555 |
|---|
| End bp | 2929817 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | peptidase T |
|---|
| Protein accession | YP_003387244 |
|---|
| Protein GI | 284037314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.91324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.989219 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC ATCAACTTTC TGAAAGTCAA CCCAGTGTTG TCGAACGTTT TCTGCGGTAT
GTCCAGATAG ACACCCAGTC GGACCCGCAG TCGACGAGGA ATCCGAGTAC CGAAAAGCAA
AAAGACCTGA GCCGGGTATT GGTGCAGGAA CTGCTCGATC TGGGCGTCTC CGATGCCGAA
ATGGACGAGT GGGGCTATGT GTACGCCACC ATTCCGGCCA ATTCTGATAA GCCGAACGTA
CCAACGATCT GCTTTTGCTC CCATGTCGAC ACATCGCCCG ATGTGACCGG AGCGGGCGTA
AAACCCATCA TTCACCGGCA GTGGAATGGC GATGATATTA TCTTACCAGA TGATCCGACC
CAACTTATCC GTGTGGCCGA CCATCCCGAT TTGACCAGTC AGGTTGGGAA CGACATCATT
ACCGCCAGTG GAACAACCCT GCTGGGGGCG GATAATAAAG CCGGGCTGGC CGAAATTATG
GCTGCTACCG AATATTTAGT TGCTCATCCG GACATAAAAC ACGGTCGTAT CCGGTTGCTG
TTTACGCCCG ATGAAGAAGT GGGACGCGGT ACCGAAAAGG TGGACATAGC CAAGCTCGGG
GCCGATTTTG GCTACACCAT CGACGGAGAA TCGCTGGGCA CGCTCGAAGA TGAAACCTTC
TCGGCCGATG CCGTCAAGAT CACCATTCAG GGCGTTAGTA CGCACCCCGG CTTTGCCAAA
GGAAAGCTCG AAAATGCCTT GAAAATTGCC GCCGATGTGC TGGCTGTTTT ACCTAAAGAT
GCCCTGTCGC CCGAAACGAC GGAGGAGAAA GAAGGGTTTG TGCATCCAAC CCGTCTGGAA
GGTAATCAGG ACAAAGCCGT TCTGGAGTTC ATTATCCGCG ATTTCACGGA AGCGGGTTTG
CATGAAAAGG AAACCTACCT GCAAAATCAG CTTAATGACG TGCTGGCCAA TTACCCCGGC
TCGTCGGCTC AGTTTGTCGT GAAGGAGCAG TACCGCAATA TGAAAGATGT GCTGGACCAA
CACCCGGCGG TAGTCGATAA TGCACTCGAA GCCATTCAGC GGGCGGGCCT GTCGGCTAAA
CGACGCAGCA TACGAGGTGG TACGGACGGG TCGAGATTGT CGTTTATGGG CTTGCCCTGC
CCGAATATAT TTGCCGGTGA GCATGCCTTT CACTCACGGC AGGAGTGGGT ATCGGTGCAG
GATATGCAGA AAGCCGTTGA GGTGATTGTC AACGTAGCAC AGGTGTGGGA AGAGCGCAGC
TAA
|
|---|
| Protein sequence | MENHQLSESQ PSVVERFLRY VQIDTQSDPQ STRNPSTEKQ KDLSRVLVQE LLDLGVSDAE
MDEWGYVYAT IPANSDKPNV PTICFCSHVD TSPDVTGAGV KPIIHRQWNG DDIILPDDPT
QLIRVADHPD LTSQVGNDII TASGTTLLGA DNKAGLAEIM AATEYLVAHP DIKHGRIRLL
FTPDEEVGRG TEKVDIAKLG ADFGYTIDGE SLGTLEDETF SADAVKITIQ GVSTHPGFAK
GKLENALKIA ADVLAVLPKD ALSPETTEEK EGFVHPTRLE GNQDKAVLEF IIRDFTEAGL
HEKETYLQNQ LNDVLANYPG SSAQFVVKEQ YRNMKDVLDQ HPAVVDNALE AIQRAGLSAK
RRSIRGGTDG SRLSFMGLPC PNIFAGEHAF HSRQEWVSVQ DMQKAVEVIV NVAQVWEERS
|
|---|
| |