Gene Slin_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2406 
Symbol 
ID8726150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2901758 
End bp2902945 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content49% 
IMG OID 
Productacyltransferase 3 
Protein accessionYP_003387225 
Protein GI284037295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.256791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAG CCTCATTCTC AGTTTCGACC ACCACCACGA ACGCGATTCC TGCCCGGCGT 
CATGACCTCG ACTGGCTCAG AGTAATTGCC ATTGTGACTC TGCTCTTCTA CCATACCGGC
ATGATTTACG TATCGTGGAA CTGGCATATA AAAAGTGCTG AACATAGTGT ACCAATGGAA
GTCGTGATGC GGTGGCTGCA TCGCTGGCGG ATGCCGTTAT TGTTCTTTAT CTCCGGGGCC
GGTACCTTCT TCGCCCTGAA AAAGCGTTCC TATAGTTCCT ATGCCGGTGA ACGCGTCCGG
CGATTGTTTG TGCCGCTGGT TTTTGGCATG TTCGTAATCG TCCCCCCTCA AATCTACATC
GAGTGGTTGT TTCGGGGACG ATTTTCCGGC AGCTACGCCG AGTTCTATCC GGAGGTATTT
AACTTTCAAC CGTACGAGGA TGGCGGAACG GGTGGGGCCT TTAGCTGGCA TCATCTCTGG
TTTGTCTGTT ACCTGTTTCT GTATTCGCTG ATCAGTATCC CCGTGTTTCG CTGGCTCAAA
CGCGAATCGG GCCAGCGTTT CGTCGATCGG ATCGGCCGAC TGATTGCCCG GCCCGGTGGA
GCACTCTGGC TCGTTGTTTT TTTGCTGCTG AATGATGTGG TTCTTGGTGG ATTCTTTCCC
CACGAAACCC ACGCGCTAAT CAATGACTGG GCTTATTTCG TGAATAACCT GATACTCTTC
TGGCTCGGGT TTATCCTGAT CAGCCGAAAA AGTTTCTGGC AGATCATCAC CGACCAGCGT
CATTACTTCC TGGCGGCTAC GGTGATTTGT ACGATTATTA TGTATGGTTC CCGAGCCTTG
ATCAGTGATG ATACCGTTGA GGCATCGAAA CTACTGACTA CGTTGTTTAG CTTCAATCGA
CTAGGGTTGA CCTGGTTTTC GGTGTTGACC ACCGTTGCCT ATGGGTATCT GTATCTTAAT
GTGAATCACC CGATTTTGCC GTACTTAAAC GAAGCCGTTT ACCCCTTCTA TATCCTGCAT
CAAACCGTTA TTGTCGTCAT CGGTTATTAC ATCATAACCC GAACATCGTT AGGCCTTTAC
AGTGGTTTTT TCATCATCAG CTTTGCCACG CTGCTTGTCT GTATCGCTAC CTATATGTTA
CTGATTCGGC CGTTTAAGTT GATGAGAGTA TTCTTCGGGT TAAAATGA
 
Protein sequence
MQPASFSVST TTTNAIPARR HDLDWLRVIA IVTLLFYHTG MIYVSWNWHI KSAEHSVPME 
VVMRWLHRWR MPLLFFISGA GTFFALKKRS YSSYAGERVR RLFVPLVFGM FVIVPPQIYI
EWLFRGRFSG SYAEFYPEVF NFQPYEDGGT GGAFSWHHLW FVCYLFLYSL ISIPVFRWLK
RESGQRFVDR IGRLIARPGG ALWLVVFLLL NDVVLGGFFP HETHALINDW AYFVNNLILF
WLGFILISRK SFWQIITDQR HYFLAATVIC TIIMYGSRAL ISDDTVEASK LLTTLFSFNR
LGLTWFSVLT TVAYGYLYLN VNHPILPYLN EAVYPFYILH QTVIVVIGYY IITRTSLGLY
SGFFIISFAT LLVCIATYML LIRPFKLMRV FFGLK