Gene Slin_2400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2400 
Symbol 
ID8726144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2895360 
End bp2896382 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387219 
Protein GI284037289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.830648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC ACCTGCCGTT ACTCTTTATC TTTTTTTTTG TTTCCTGCCA GTCAACAGCC 
CAGAAAGTTG TTCAGCCGGT TTTTATTACC GATACCGTCC GGCATGACAC CGACGACCCC
GCCATCTGGA TTAACCCGGC CGATCCGGCC AAAAGTCTCG TTATTGGTAC CGATAAGGAC
CAGGACGGCG GCTTGTATGT ATTTGATCTG AAAGGTAAGA TCGTGCGTGA GGTTCACGAC
CTTAAACGTC CCGATAATGT AGACGTGGCC TATGGGCTGA TACTGGGCGG CAAACCAACC
GATATTGCCG TTACTACCGA ACGATTTACG CATAAGCTCC GAATATTCTC ATTGCCCGAC
ATGAAACCCG TCGACAACGG TGGCCTCGAC ATGTTTGTAG GCGATACCGG AGAAGGGTTC
CGGGATTTGA TGGGCATTGC GGTCTATAAA AACCCAAAAG GCATTCTCTA TGCCATGGTA
GGCCGTAAAT CCGGCCCGAC AGACGGCTCA TACATTGGCC AGTATCAACT CGAAGACGAT
GGCGTCGGAC AGATTAAGGC TACGCTGATC CGGAAGTTCG GTCAGTACAG TGGCAAAAAG
GAAATCGAAT CCATCGCCGT GGATAACGAA TTAGGCTTTG TTTATTATTC CGACGAAGGC
GTTGGTGTCC GGAAGTACTA TGCTGACCCT GAAAAAGGGA GTCAGGAATT AGCACTTTTT
GCAAAAACGG GCTTTGCTGA AGACCATGAG GGTATTTCTA TCTACAAAAC AGGCCCCAAA
ACTGGTTTTA TCCTGGTGTC AGACCAGGGG GCCAATCAGT TTCACATCTT CAAACGCGAA
GGGGAACCCG GCAACCCGAA TGAGCACAAA CTTGTCAAAA TCGTTAAAGT AGCGGCCCAG
GTAAGCGACG GCTCCGACGT AACGAACGTT CCTCTTGGCA AGCAGTTTCC CCACGGCCTG
TTCGTGGTTA TGTCAGAAGG CAAAACTTTC CACTACTACC GCTGGGAAGA CATTATTAAA
TGA
 
Protein sequence
MKHHLPLLFI FFFVSCQSTA QKVVQPVFIT DTVRHDTDDP AIWINPADPA KSLVIGTDKD 
QDGGLYVFDL KGKIVREVHD LKRPDNVDVA YGLILGGKPT DIAVTTERFT HKLRIFSLPD
MKPVDNGGLD MFVGDTGEGF RDLMGIAVYK NPKGILYAMV GRKSGPTDGS YIGQYQLEDD
GVGQIKATLI RKFGQYSGKK EIESIAVDNE LGFVYYSDEG VGVRKYYADP EKGSQELALF
AKTGFAEDHE GISIYKTGPK TGFILVSDQG ANQFHIFKRE GEPGNPNEHK LVKIVKVAAQ
VSDGSDVTNV PLGKQFPHGL FVVMSEGKTF HYYRWEDIIK