| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2399 |
|---|
| Symbol | |
|---|
| ID | 8726143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 2893973 |
|---|
| End bp | 2895274 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003387218 |
|---|
| Protein GI | 284037288 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TACTAATCCT GGCCGCGTTC TCGGCGGCAT TGCTGGCGGG TTGCTCCAAA
AGCACCGATA CGACCACTAC CGTTACGCCG ACACCGGTTC CGGTGGTAAA AGAAGCGGTA
TCGGGCGATG TGTCCGGCAC CTGGGCCAAA GGGAGTACCT ACAAAATTAC CGGGCATTTG
CAGGTACCTA CCAGCCAGTC GCTGGTGATT GAAGAAGGTG TAAACATCGT GTTCAGCGAC
TCGACCGTTA AGCCGGAGAT GATCGTCCGG GGAAATCTTT ACGTGATGGG CACATCGGCA
AATCCAGTGA AATTTACGGT GCCCGATGCC TGGAAAACGA CGGCCAACCA ATGGGGTAAT
TTATGGGGTG GTATCATTGC CGCGCCAACC TGTGCTGAAA TGCTGATCGA CAACGCCATT
CTTGAATACG GTGGTGCAGT AACCACCGAA AGCTCGCCCT CGGTGAAAGC TGGTCTTTAT
AAAGCAGCCG CCGGAAACCA CGTACCTGCC GTCAACTACT CCAATGTGAA CGGCAAGCTG
GTAATTGTCA ATAGCCGGTT GAACAACCAG AACGAAGATG GTTTCTATGT TGAAGGTGGT
AAAGTGATCA TCGCCAATAA CAAAATCTAC ACACAGGGCG TATCGGGTGG CGATGCCATC
AACATTAAAT CGGGCGTCCA GGCCGATGTG GCCTTCAACC TGGTTTATAG CCCAAACACA
AACGCGCTTA AACTCTCCAA TTCCGGCGAC CGGTCGCCAC AAGCATACAT TGTTGCCTAT
AACAACACAA TTGTGAACGC GGGCTGGCGC CGACCAACGA TCAAAGGCGG TTCGATCTGG
ATAGAAGTTG GTGTAAGGGC CGATTTGTAT AACAACCTGC TGGCCAATGA CCGGTTTGGG
GTTAAGCGTG ATCCTAAGAA TGCCGAAGAT CCTCGCTCGA AGGTCAGCAA CAACCTGTAC
TACGGTTATA CGCAGGATGG CGTTACGGGT TTCCAGCCTT CGCCTGCGCC AATCCCCCCC
TCTACACTTT TACCTGAAAT CCTGGCCGGC ACCAACGACG TCATCAGCAA AACCGTTGGC
GATAACGATC CGAAATTTGT GAACTATCCG CTTGCCACCG AGTCTAAAAA TGCGGTGTTC
AACACGGCCT GGGATTTCCG GCTACAGAGC GGTTCGCCAG CCATTGGCAA AGGCACCACA
AGTTTCACCC GGCTCTATGC CGACGGGCTT TCCTTCGCGA ATGGTACACT GTATAAATCG
CCAGCCCCCT CAACAACCAT TGGTGCCTTT GGAACCAACT AA
|
|---|
| Protein sequence | MKKVLILAAF SAALLAGCSK STDTTTTVTP TPVPVVKEAV SGDVSGTWAK GSTYKITGHL
QVPTSQSLVI EEGVNIVFSD STVKPEMIVR GNLYVMGTSA NPVKFTVPDA WKTTANQWGN
LWGGIIAAPT CAEMLIDNAI LEYGGAVTTE SSPSVKAGLY KAAAGNHVPA VNYSNVNGKL
VIVNSRLNNQ NEDGFYVEGG KVIIANNKIY TQGVSGGDAI NIKSGVQADV AFNLVYSPNT
NALKLSNSGD RSPQAYIVAY NNTIVNAGWR RPTIKGGSIW IEVGVRADLY NNLLANDRFG
VKRDPKNAED PRSKVSNNLY YGYTQDGVTG FQPSPAPIPP STLLPEILAG TNDVISKTVG
DNDPKFVNYP LATESKNAVF NTAWDFRLQS GSPAIGKGTT SFTRLYADGL SFANGTLYKS
PAPSTTIGAF GTN
|
|---|
| |