| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2367 |
|---|
| Symbol | |
|---|
| ID | 8726111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2851798 |
|---|
| End bp | 2853540 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | peptidase M14, carboxypeptidase A |
|---|
| Protein accession | YP_003387186 |
|---|
| Protein GI | 284037256 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.639683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.513126 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAC TTCCCTATTT CCTTACCCGT TTTTCCTGCT TTGTTCTTTT ACTTGCTCAA
CTGGTGTCGG CCTCCGTATC TGGTCAGAAT AAAGCCGCAG AGGTAACCCC TTACGAGCGC
GATACGACCC AAACTGCTAC TTACCCACAG ATTATCGACT GGTATCAGAA GCTGGACCGG
CAGTATGAGC AGGCCAGATT GGTTGAGATT GGTAAAACTG ACATTGGGAA GCCCCTGCAC
TTGTTTCTGC TGGCGGCTGA TAAACAGTTT ACGGCCCGGC CGGATCGCGT TACGCTCTTG
ATCAATAACG GGATTCACCC CGGCGAACCC GAGGGAATTG ACGCTTGTAT GATGCTGGCA
CGTAACCTGC TCAACGGAAA TAAACTCCCC AAAAACGTGC TGATTGCCAT TGTACCCGTA
TACAACGTGG GCGGTAGCCT GAACCGGGGC GTGTCGCGGG TGAACCAGAA CGGGCCGGTG
TCTTATGGGT TTCGCGGAAA TGCCCGCAAC CTGAATCTCA ACCGCGATTT TATCAAGGCC
GAAGCCGAAA ACACGAAAGC GTTTCAGACC ATGTTTCAGT CGCTGAAACC ACAGGTATTC
GTCGATAACC ACACCAGCGA CGGTGCGGAT TACCAGCACG TACTGACTTA TTTTGCTACC
CAGAAAGACA AGCTTCACCC GGAAGTGTCG GGCTATATGA CGGCGCGCTT CCAGCCGGAG
CTGGATAAAT TACTGATCGC GAAAGGCTTC CCGCCCGCGC CCTACGTGAA TCATGCCGGC
GATACGCCCG AAAGCGGGCT GGTTGGTTAT AACGATACCC CGCGCTATTC GACCGGATAC
GCGGCCCTGT TCAACTGTTT CGGGTTTACG CTGGAAACCC ACATGTGGAA GCCTTTCCCG
GCGCGGGTCG AAGCATCGTA TGTGTTCGAT GAAGCCGTTA TTCGCCTTTG CGAGCGTGAA
GCCGGGACGA TCCTGGCAAA CCAAAAACGG GCAAATGATG CCGTCCGTAC TCAGAAAACC
TTCGCGCTGA GTACAAAACT TGACCGCAGT AAAACAGATT CAGTGACATT TCTGGGGTAT
GCTGCGGCTT ATAAGCCGAG CGAGGTGTCG GGGTTGAAAC GGCTATATTA CGACCGGTCG
AAACCATTTA CGAAGCGCGT TCCGTACTGG AATACATTTA CCATTGATAC GCAGGTTGAC
AAGCCCCGCA GTTATGTCAT TCCGCAAGCC TGGCGGGAAG TCATCGGCGA ACTGAAGCGG
AATGGCGTCC GATTGCAAAC CCTGCCGAAA GACACCCTGA TGACCGTTTC GGCTTATTAC
ATTACGGAGT ATAAAAGCCC GCAGCGCCCC TACGAAGGCC ACTTCATTCA TACGGGCGTA
AAAGTGCGGA CGGAGATGCA GCCTATCCAG TTTTACAAAG GCGACTATCT GGTTCAGACC
GATCAGGCTA CCAATCGGTA CATTGTCGAA ACGTTGGAGC CGCAGGCTGT CGATTCTTTT
TTTGCCTGGA ATTTCTTCGA GAGCATCCTT GACCAGAAAG AGTATTTCTC CAACTACATC
TTCGAAGATA CAGCCGCCGA ACTGGTGAAA AACGATCCGT CGTTACGGAA GCAACTGGAT
GAAAAACGGG CTACGGACAA AGCCTTCGGC GAAAGTGCCA ATGCCCAACT GGATTTCATC
TACCAGCGAA CACCTTATTA CGAAAAAACG CACAATCGCT ACCCGGTTTA CCGACTGAAT
TAA
|
|---|
| Protein sequence | MAKLPYFLTR FSCFVLLLAQ LVSASVSGQN KAAEVTPYER DTTQTATYPQ IIDWYQKLDR
QYEQARLVEI GKTDIGKPLH LFLLAADKQF TARPDRVTLL INNGIHPGEP EGIDACMMLA
RNLLNGNKLP KNVLIAIVPV YNVGGSLNRG VSRVNQNGPV SYGFRGNARN LNLNRDFIKA
EAENTKAFQT MFQSLKPQVF VDNHTSDGAD YQHVLTYFAT QKDKLHPEVS GYMTARFQPE
LDKLLIAKGF PPAPYVNHAG DTPESGLVGY NDTPRYSTGY AALFNCFGFT LETHMWKPFP
ARVEASYVFD EAVIRLCERE AGTILANQKR ANDAVRTQKT FALSTKLDRS KTDSVTFLGY
AAAYKPSEVS GLKRLYYDRS KPFTKRVPYW NTFTIDTQVD KPRSYVIPQA WREVIGELKR
NGVRLQTLPK DTLMTVSAYY ITEYKSPQRP YEGHFIHTGV KVRTEMQPIQ FYKGDYLVQT
DQATNRYIVE TLEPQAVDSF FAWNFFESIL DQKEYFSNYI FEDTAAELVK NDPSLRKQLD
EKRATDKAFG ESANAQLDFI YQRTPYYEKT HNRYPVYRLN
|
|---|
| |