Gene Slin_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2350 
Symbol 
ID8726094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2829953 
End bp2830615 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content54% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003387170 
Protein GI284037240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.575927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.731614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACACC TCCAGAACAT CGAAAAAGTT TACCGGACCA GCACCATCGA AACGCTGGCG 
CTAAACAACA TCAACCTCGA CATTAAAAAA GGGGAGTTCG TCTCCATCAT GGGGCCCTCG
GGTTGTGGCA AGAGTACCCT GCTCAACGTC ATGGGGTTGC TCGACGAACC CTCAAAGGGA
ACCGTGCAGC TCGACGGCCA GCCGGTCACC AAATACACCG ACAAAGAACT GGCTAAACTG
CGTAATCAGA AGATCGGCTT CATCTTCCAG AGCTTTCACC TCATCAACGA CCTGACGGTG
CTCGATAACG TCGAGATTCC ACTGCTCTAT CGGTCAACGA ACGGGAAACC CCGGCAGGAG
TACGCCAAAG AAGCCCTCGC CAAAGTGGGC CTGAGTAACC GCATGAAACA CTTCCCGAAG
CAGCTTTCGG GCGGACAGAA GCAGCGTGTC GCCATCGCCC GTGCCATTGT TGGCAACCCG
GATATTATCC TGGCCGATGA GCCCACCGGC AACCTCGACA GCGCCATGGG CAACGAAATA
ATGACTATCC TCCAGGACCT CAACAATGAG GGTGCCACCA TCGTAATGGT CACGCACGAT
GAACAAATGG CTAAACGCAC CCACCGCCTT ATCCGGCTAT TTGACGGCAC GCAGGTTTTA
TAA
 
Protein sequence
MIHLQNIEKV YRTSTIETLA LNNINLDIKK GEFVSIMGPS GCGKSTLLNV MGLLDEPSKG 
TVQLDGQPVT KYTDKELAKL RNQKIGFIFQ SFHLINDLTV LDNVEIPLLY RSTNGKPRQE
YAKEALAKVG LSNRMKHFPK QLSGGQKQRV AIARAIVGNP DIILADEPTG NLDSAMGNEI
MTILQDLNNE GATIVMVTHD EQMAKRTHRL IRLFDGTQVL