| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2342 |
|---|
| Symbol | |
|---|
| ID | 8726086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2821725 |
|---|
| End bp | 2822549 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003387162 |
|---|
| Protein GI | 284037232 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.477655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.561455 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGACA TCGACGTTAT TATGCCGCGC TTGTTTACCG AAGGCACCCG TGATCTCCAG
GTTAGTCTTA CTCTGCAACC CGGTACCCTC ACCGCCCTGA TCGGGCCGTC GGGCTCCGGG
AAAACAACCT TTCTGCGCTT ACTGGCTGGA CTGGAAAATC CGCAATCAGG TCGAATTTCA
GTCGATGGTG AGCCGTGGCT TGATACTGAT AAACGGATAA ATCGTCCTCC GCAAAAGCGG
TCCATCGGGT TTGTCTTTCA GGATACGGCC CTGTTCCCAA ACATGACCGT TCTGGAAAAT
ATTCAGTTTG CAGCACCGAA AGGCCAGCGC GATTTCGGGC AGGAGTTGAT CAGAGCTACC
GGGCTGGAGG CCTTCACGCA TGCAAAGCCC GCAGCCTTAT CGGGTGGGCA GCGCCAGCGG
GTGGCCCTCG CCCGCGCCCT CGTTCGTCAG CCAAAACTGT TACTGCTCGA TGAGCCGTTT
GCTGCCCTGG ACGCCGATTC CAGTCAACAG CTTCGGCAGG TGCTGCTGGA ATTACACAAA
CGCTGGGGCA CAACAACCCT GCTGGTGAGC CACCACGACG CCGATGTAGA AGCCCTCGCC
GACCGAGTCG TTCAGCTGGT GCAGGGGCGC GTTCAGACGG ATCGGCTCCG AAGTGAACAC
CCGCCTGTTT CGCCGGTGAT TGAGCCGATA CTGGCTATTA CTTTCGATGA ACAGCGGCAG
GTGTGGGTAA TCAAAACGGC CACCACTCAA CTTCGCTCCA CCAATCCGGT TTGGGGGAAA
TGGAAAGTAG GGGATATGAT AGAGATAGGT GGTCGTAATG TGTGA
|
|---|
| Protein sequence | MIDIDVIMPR LFTEGTRDLQ VSLTLQPGTL TALIGPSGSG KTTFLRLLAG LENPQSGRIS
VDGEPWLDTD KRINRPPQKR SIGFVFQDTA LFPNMTVLEN IQFAAPKGQR DFGQELIRAT
GLEAFTHAKP AALSGGQRQR VALARALVRQ PKLLLLDEPF AALDADSSQQ LRQVLLELHK
RWGTTTLLVS HHDADVEALA DRVVQLVQGR VQTDRLRSEH PPVSPVIEPI LAITFDEQRQ
VWVIKTATTQ LRSTNPVWGK WKVGDMIEIG GRNV
|
|---|
| |