Gene Slin_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2329 
Symbol 
ID8726073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2812470 
End bp2813501 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content50% 
IMG OID 
Productglycoside hydrolase family 43 
Protein accessionYP_003387149 
Protein GI284037219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000753035 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.46134 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAGG TCGACGGTAA AAAAGACGAT AAGCACACAA TGAGTACCAA GTTAGTATTA 
CTCACCATAT GGTTCACCAT TCAGGTAGCA CTGGGTTTTT CGCAGAACCG GGTGCCGGTT
ATCCGGGAGA ACGTACCCCT GGATTCAATT CGGCTGAGCG ATCCGTTCGT TCTGGCGGAT
AAGCCTACCG GCATGTATTA TATGACGGGG ACGGGAGGCA TGTTGTGGAA AAGCAAAGAT
CTCAAAAGCT GGACGGGTCC GTTCAGCATC GCCAAAACCG ACCCTGAATC CTGGATGGGC
AAGAATCCGA TGATCTGGGC CGCCGAGCTG CATGCCTATA AAAACAAGTA CTACTACTTC
GCCACGTTCA CCAATCGGGA GGTGAAAATT GATACAGTGG GTGAAAACGT CATCGAACGT
CGGGCCAGTC ATATTTTAGT CAGTGACAAA GCCGAGGGAC CGTATGTACC CATGAAAGAC
CCGATTTATC TGCCTGCCGA CAAACCTACG TTAGACGGTA CGTTTTGGGT GGATAAGGAC
GGGAAGCCCT ACATGGTATA CTGTTACGAA TGGCTGCAGA ACCTGAACGG AACCATGGAG
AAAATAGCGC TCAAACCTGA TTTGAGTGGT TCAATCGGCG AAGGGAAGTT ACTTTTTCGG
GCCAGTGACA GCCCCTGGAG TCGCGAGAAA AAGACTGGTG GACCCAATAA AGTGACGGAT
GGTCCATTTC TATTCCGTAC CGGAACCGGC AGGCTCGGTA TGATCTGGAC CAGTTGGATC
GACGATGTGT ATACGCAGGG CGTTGTTTAT TCGAAAAACG GTACGCTGGA TGGTCCCTGG
ATTCACGAAA AGGAGCCAAT CACCCCACCG AATTTTGGTC ACGGCATGCT ATTTCAAACC
TTGACCGGCA AATGGCTGAT GTCTGTCCAC AGTCATTACA ACAGCAACGG CCGTTATATC
CGAAATCCTC ATTTTTTCGA GGTCGACTTT TCGGGCGATA AGTTGATCGT TGGAAAGCCT
TATGTGCCCT GA
 
Protein sequence
MIEVDGKKDD KHTMSTKLVL LTIWFTIQVA LGFSQNRVPV IRENVPLDSI RLSDPFVLAD 
KPTGMYYMTG TGGMLWKSKD LKSWTGPFSI AKTDPESWMG KNPMIWAAEL HAYKNKYYYF
ATFTNREVKI DTVGENVIER RASHILVSDK AEGPYVPMKD PIYLPADKPT LDGTFWVDKD
GKPYMVYCYE WLQNLNGTME KIALKPDLSG SIGEGKLLFR ASDSPWSREK KTGGPNKVTD
GPFLFRTGTG RLGMIWTSWI DDVYTQGVVY SKNGTLDGPW IHEKEPITPP NFGHGMLFQT
LTGKWLMSVH SHYNSNGRYI RNPHFFEVDF SGDKLIVGKP YVP