Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2317 |
Symbol | |
ID | 8726060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2796472 |
End bp | 2797332 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | dihydropteroate synthase |
Protein accession | YP_003387137 |
Protein GI | 284037207 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.052999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0227117 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGAAAG TTACAAAAAA AACGCTCAAC TGCCGGGGGC GGCTGCTCGA TTTAGCCCAA CCTGCGGTTA TGGGCATCCT TAATATCACC CCTGATTCAT TCTTTACCGG TAGTCGCGTA TCTCTCGATG AGACCCTTTT GCGGGCAGGT CAGATGCTTA CGGATGGGGC AACCTTTCTG GACGTTGGAG GGTATTCCAC CCGGCCCGGT GCCGCCGACG TAAGCCCTGC TCAGGAAGCA GATCGGGTTA TTCCGGTCAT TGAGTCAATT TTAGCAAATT TCCCCGACGC ACTGGTATCG ATCGATACCT TTCGCGCTTC GGTAGCCCGG CAGGCTGTTG AGGCAGGAGC CTGTGTTATA AACGATGTAT CGGGGGGAAC ACTCGACCCG GCTATGTTCG ATACAGTGGG TGAACTGGCC CGCTCAGGAA TGGGTGTTCC GTACGTATTG ATGCACATGC GCGGCACACC GCAAACCATG CAATCGATGA CCACTTACCA ACAGCTTGTG GTTGATGTGA TCGATGAACT AGCCAGTCAG TTGGCGCGCT TACGGACGCG GGGAGCGACA GATATAATTT TAGACCCTGG ATTTGGCTTT GCCAAGACGC CTGCGCAAAA TTTTGAGTTG TTAAATAGTC TGAATAGCTT CCACATTTTT GACGAGCCAC TCCTGATCGG TTTATCTCGC AAAACGACGG TCTGGAAGAC CCTGAATATC AAACCAGAAG AGGCCCTGAA TGGTACGACA GTACTCAATA CGGCAGCCCT GCTGAAAGGG GCGTCCATTC TGCGCGTTCA CGATGTCCGG GAGGCTGTTG AGGCAGTAAA ACTTACACAA AAAATAATTT TATTTGACTA G
|
Protein sequence | MPKVTKKTLN CRGRLLDLAQ PAVMGILNIT PDSFFTGSRV SLDETLLRAG QMLTDGATFL DVGGYSTRPG AADVSPAQEA DRVIPVIESI LANFPDALVS IDTFRASVAR QAVEAGACVI NDVSGGTLDP AMFDTVGELA RSGMGVPYVL MHMRGTPQTM QSMTTYQQLV VDVIDELASQ LARLRTRGAT DIILDPGFGF AKTPAQNFEL LNSLNSFHIF DEPLLIGLSR KTTVWKTLNI KPEEALNGTT VLNTAALLKG ASILRVHDVR EAVEAVKLTQ KIILFD
|
| |