Gene Slin_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2307 
Symbol 
ID8726050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2787195 
End bp2787647 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content48% 
IMG OID 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_003387127 
Protein GI284037197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00103306 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACAAG CAAAATCTGG CGATACCGTT CAGGTACATT ATACCGGAAC CCTAAGTGAT 
GGAACGATCT TCGATTCATC AGAAGGTCGT ACACCACTGG AGTTCACTGT TGGCAGTGGG
CAGGTTATTA AAGGGTTCGA TGATGGTGTG ACGGGTATGA ATCAGGGCGA AAAGAAAACG
ATTAATATTC CGGTTCAGGA CGCCTACGGA CCCGCCAATG AAGAAATGAT TTTTACGCTG
GAACGTTCGG ATATTCCGGC GGATATACCA CTTGAAGTTG GCATGACCCT CAATATGCAC
GAAGACGGAA ACCCACGGCC CATTCCGGTA ATTGTGCGTA CACTGACCGA TACAAACGTT
ACGCTGGACG CCAATCACCC GCTGGCTGGC CAGGATTTGA CTTTCGATAT TGAATTGGTT
GGCGTTAAGT CGCCCTCTGG TTTGATTCTG TAA
 
Protein sequence
MAQAKSGDTV QVHYTGTLSD GTIFDSSEGR TPLEFTVGSG QVIKGFDDGV TGMNQGEKKT 
INIPVQDAYG PANEEMIFTL ERSDIPADIP LEVGMTLNMH EDGNPRPIPV IVRTLTDTNV
TLDANHPLAG QDLTFDIELV GVKSPSGLIL