Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2281 |
Symbol | |
ID | 8726023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2762020 |
End bp | 2762994 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003387101 |
Protein GI | 284037171 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00884942 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0771332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGT CCGAGAAAAT GGAGATTATA AGCTTAGTCG AACAGTCACC CCTGAGCGTA AAGGCCACGT TACGGGAACT GGGGATCAAC CGAGCTACTT TTTACAGTTG GTATAAGCGT TATTTAAGCG ATGGCTTTGA TGGCTTGGCC GATCAGCCTT GCCGTCGGAC AAGCATCTGG AATCAACTAC CAATAGCTGA AAAAAATCGA ATTGTTGAGC TAGCTTTAGA TCGCCCTGAC CTTTCCAGTC GCGAACTGGC TTGCTATATT GTTGATAACG AGCAATGGTT TGTGTCGGAA TCGACGGTTT ACCGGGTTCT CAAAAGTCGG GGACTAATCA CTACCCCTGC CTATCGGTTG ATGGAAGCGG CTGACCACTT CTATAATCCT ACCACGGCAC CCAATCAACT TTGGCAGACC GACTTTACGT ACTTTAAGAT CAAGCATTGG GGATGGTATT ATCTGTCGAC AGTGCTGGAT GACTACTCTC GCTATATTTT AGCCTGGGAA CTCTGTCCAG GCATGCAGGC GACCGATGTG GAGCGAACCG TCCAAGCTGC TCTGAAAGCG AGTAGCCTGA AAAGTGGTCA GCGGCCACGT ATGCTGTCCG ACAATGGGTC GGCTTATGTG TCTCGGTATC TAAAGGATTA TCTGAAAGGA GAAAGCATCG ATCATATTCG TAGCGCTCCC TTTCATCCTA TGACCCAAGG AAAGATTGAG CGGTATCATC GATCCATGAA AAACGTCCTG TTATTGGAAC ACTACTATAG TCCGGATGAA CTAAGAACCC GTCTAACGGA GTGGGTAGAC TACTATAATC ATCAACGGTA CCATGAATCA TTGGACAACG TACGGCCGGC GGATGCTTAC TGGGGTCGCC AAGAGCAGAT CTTGGCCCAT CGGCAAAAAA CGAAGCAGCT AAGTTTGTCC CAACGCCGGA AAAATCATAT TTTTCAGCGA GCCCAAAGTG GCTAA
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Protein sequence | MTQSEKMEII SLVEQSPLSV KATLRELGIN RATFYSWYKR YLSDGFDGLA DQPCRRTSIW NQLPIAEKNR IVELALDRPD LSSRELACYI VDNEQWFVSE STVYRVLKSR GLITTPAYRL MEAADHFYNP TTAPNQLWQT DFTYFKIKHW GWYYLSTVLD DYSRYILAWE LCPGMQATDV ERTVQAALKA SSLKSGQRPR MLSDNGSAYV SRYLKDYLKG ESIDHIRSAP FHPMTQGKIE RYHRSMKNVL LLEHYYSPDE LRTRLTEWVD YYNHQRYHES LDNVRPADAY WGRQEQILAH RQKTKQLSLS QRRKNHIFQR AQSG
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