Gene Slin_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2280 
Symbol 
ID8726022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2761602 
End bp2762006 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content49% 
IMG OID 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_003387100 
Protein GI284037170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00249906 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0576324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAT CGACTAAACC AACTCCATCA AAACGTTCCG CAGCTAACTC ATCGACTTCG 
GCGGAACGAA AACCGGCCTT ATCCATCATC AAAGACATTC AGCGACAAAC CCGACGCCAA
TACACGGCGG AAGAAAAGAT TCGCATTGTG CTGGAAGGCC TACAAGGCGA ACAGTCAGTA
GCCGAGATCT GTCGGCGAGA AGGACTCAAC ACCAACATTT ATTACCGCTG GAGTAAAGAG
TTCCTAGAAG CGGGTAAAAA GCGATTAGCC GGTGACACAA CCCGGGAAGC CACTGCTCCT
GAAGTGCAGT CCATCAAGTC CGAAAATGAG GCCCTCAAAC AGCTGGTAGC CGAACTAAGC
TTGGAGAATC GGGTATTAAA AAAAAGCCTT AAGGCCGACG ACTAA
 
Protein sequence
MSKSTKPTPS KRSAANSSTS AERKPALSII KDIQRQTRRQ YTAEEKIRIV LEGLQGEQSV 
AEICRREGLN TNIYYRWSKE FLEAGKKRLA GDTTREATAP EVQSIKSENE ALKQLVAELS
LENRVLKKSL KADD