| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2274 |
|---|
| Symbol | |
|---|
| ID | 8726015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2754851 |
|---|
| End bp | 2757115 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosylformylglycinamidine synthase II |
|---|
| Protein accession | YP_003387094 |
|---|
| Protein GI | 284037164 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00429114 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.210249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAA CCGAATCGCT ACCCTCGCTT GAAACTGCCC GCAAACTGGG CCTGCTGCCC
GAAGAATTTG ACCGCATTGC CGAAATTTTA GGGCGTCGGC CAAATTTTAC TGAACTGAGT
ATCTTCTCGG TGATGTGGTC GGAACACTGT TCCTATAAAA ACTCCATTGT CTGGCTTAAA
ACGCTCCCCC GCGACTCGGA CCGGATGCTG GCCAAAGCCG GAGAAGAAAA TGCGGGCCTT
GTCGATATTG GCGACGGACT GGCCTGTTCG TTCAAGATTG AGTCGCATAA CCACCCGTCG
GCGCTGGAAC CCTACCAGGG CGCGGCAACG GGCGTTGGCG GAATCAACCG CGATATTTTT
ACGATGGGCG CGCGGCCCAT TGCCCAGTTG AACTCACTCC GGTTTGGCGA CCTGACATTG
CCCAAAACCC GGCGGCTGTT GCGCGGTGTT GTCAAAGGCA TCGGCGATTA TGGTAATGCT
TTCGGTATTC CAACCGTTGG TGGCGAATTG TACTTCGATG AGTGCTACAA TACCAATCCG
CTGGTTAACG CGTTTTCGGC GGGTATCGTT GAGGTAGGTA AATCGGCGAA AGCAACCAGT
TATGGTGTGG GCAATCCCGT ATTTATCGTT GGCTCGGCAA CGGGTAAAGA CGGAATACAC
GGGGCTACGT TTGCATCGGA AGATATTTCG GCCGCATCGA CCGATAAACT TCCGGCCGTA
CAGGTTGGCG ATCCGTTCAT GGAGAAACTT CTGCTCGAAG CCAGCCTTGA AATTATTGAA
ACGGGCTACG TAATCGGTAT TCAGGATATG GGTGCCGCCG GGATCATCTG CTCGACTTCC
GAGATGAGCG CGAAGGGTGA ACACGGTATG ATTATCGACC TCGATAAAGT GCCCACCCGT
CAGCCCAACA TGGCCCCGTT CGAGATTCTG CTGTCGGAGT CGCAGGAACG GATGCTGGTG
GTCATTGAAA AAGGCAAAGA GCATATTATC CAGGGTATTT TCGACAAGTG GGACCTCAAC
TGCGCCCAGA TTGGCGAAGT GACCGCTAAA GGAGAAAACG ACCTCGGTCG GCTGCATTTC
TACCGGCATG GCGAACTCGT CGCCGACGTG CCCGCCTACG ACCTTGTGCT TGGGGGCGGT
GCACCCGTAT ACCACCGGGA ATATAAAGAA CCTGCTTATA TTAAGGAGTT CGCCAAGTTC
GACATCGCTG ATGTAGACGA CATTGAGCGG GAGGATATTA AGGACATTGC CGAGCACCTG
CTGTCGCACC CGAACATCTG CTCGCGCAAG TGGGTGTATG AACAATACGA TTCTATGGTG
GGTACGGGCA ACCGCAGCAC CAACGCGCCG TCTGATGCGG CTGTGGTGCG CGTGAAAGGT
CCCGGCATTC CGGCAACGGA CAAATCCATC GTGATTACAG TCGACTGCAA CAGCCGCTAT
GTGAACGCCA ACCCGCGTGA GGGAGCAAAG ATTGCCGTTG CTGAAGCCTG CCGCAACATT
ATTTGCAGTG GGGGCGAGCC GCTGGCCGTA ACGAACAACC TGAACTTCGG GAACCCGTAT
GTGCCGGAAG TCTACTGGCA TTTTGTAGAG GCCGTTCAGG GTATGGGCGA AGCCTGCCGC
CGGTTCAGCA CCCCCGTAAC GGGCGGTAAC GTGAGTTTCT ACAACCAAAG CTCCGACGAT
GGCCCGGTAT TCCCGACGCC AACCATTGGT ATGCTCGGTT TGATGGAAAA TCCGGCTCAC
CAACTGACTT TGGACTTTAA AAATGAGGGC GATTTGATCT ACCTCATCGG GCAGTCGACC
AACGATATTG CCTCTTCGGA ATACTTGTAT TCATACCTGG GCATCAAAGC CTCGCCCGCA
CCTTATTTCG AGTTCGACGA TGAATGGCAC GTTCAGGAAG GTATCAAAAC TATGAACCGG
AACGGCTGGA TTCTTTCGGC GCACGATGTA TCGGACGGTG GTTTGTTCGT TACTTTGGCT
GAGTCGGCGA TGGCGGGTAA TAAAGGTTTC GAGATCGTGT CGGACGACCG GCACCGGCTC
GACTCGTTCC TGTTCGGTGA AAGCCAGAGC CGCGTTGTGG TAACGGTCTC GCCCGAACAT
CAAAAGACTG TTGAGGGGTA TTTACACGAT ACCATCATGC CGTTTATGTT GTTAGGAACG
GTAACGAGCA CATCCCCTGC GTTTGTTGTC GATAATACGC CGGTGATGAC ACTGGCCGAA
GCAAAGGATC TGTACGATAA TGCATTAGGC AAGATAATGG CTTAA
|
|---|
| Protein sequence | MDATESLPSL ETARKLGLLP EEFDRIAEIL GRRPNFTELS IFSVMWSEHC SYKNSIVWLK
TLPRDSDRML AKAGEENAGL VDIGDGLACS FKIESHNHPS ALEPYQGAAT GVGGINRDIF
TMGARPIAQL NSLRFGDLTL PKTRRLLRGV VKGIGDYGNA FGIPTVGGEL YFDECYNTNP
LVNAFSAGIV EVGKSAKATS YGVGNPVFIV GSATGKDGIH GATFASEDIS AASTDKLPAV
QVGDPFMEKL LLEASLEIIE TGYVIGIQDM GAAGIICSTS EMSAKGEHGM IIDLDKVPTR
QPNMAPFEIL LSESQERMLV VIEKGKEHII QGIFDKWDLN CAQIGEVTAK GENDLGRLHF
YRHGELVADV PAYDLVLGGG APVYHREYKE PAYIKEFAKF DIADVDDIER EDIKDIAEHL
LSHPNICSRK WVYEQYDSMV GTGNRSTNAP SDAAVVRVKG PGIPATDKSI VITVDCNSRY
VNANPREGAK IAVAEACRNI ICSGGEPLAV TNNLNFGNPY VPEVYWHFVE AVQGMGEACR
RFSTPVTGGN VSFYNQSSDD GPVFPTPTIG MLGLMENPAH QLTLDFKNEG DLIYLIGQST
NDIASSEYLY SYLGIKASPA PYFEFDDEWH VQEGIKTMNR NGWILSAHDV SDGGLFVTLA
ESAMAGNKGF EIVSDDRHRL DSFLFGESQS RVVVTVSPEH QKTVEGYLHD TIMPFMLLGT
VTSTSPAFVV DNTPVMTLAE AKDLYDNALG KIMA
|
|---|
| |