Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2268 |
Symbol | |
ID | 8726009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2749520 |
End bp | 2750668 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Chitinase |
Protein accession | YP_003387088 |
Protein GI | 284037158 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.149886 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TTCTTCCTAT CGTTGCCCTT ATGCTGGTGC TGCTCGGGCA AAATCTGCTG GCTCAATCCG CAAAATCGCA TCCATATGTT GTCATTGGCT ACGTAACCGG CAGCGGCTGG ACAAAAGATC AGATCGAAGC GCAGAAACTG ACCCACATCA ACTATGCATT CGGCGTTCCG GACGAAAAAG GCGAAATCGC CCCGCTGACT GCCAAAGATG GCGAGAATCT GGCAAAGCTC ACTTCCCTCA GAGCCAACAA TAAAGACCTC AAAATTTTAC TTTCCATTGG TGGCTGGGGC GGCTGCAAAT ACTTTTCCGA TGCGGCTCTG AATGAGGCCT CCCGCCAAAA ATTTACGAAC AGCGCCGTTG CGATCCTGAA AAAACACCAG CTCGATGGTA TCGATATCGA CTGGGAATAC CCCGATCAGA TTGGTGCCGG GAATATCTAC CGCCCCGCCG ATAAACAAAA CTTTACCCTG TTTCTGAAAT CCCTGCGGGA TGGGCTGGAT AAACAAGGGA AGCTGGACAA GCGCACGGGT AAAAATCACT ACCTGCTCAC AGCCGCCACT GGTGGCGACA CGGCTTTTGT GAACCATACG GAATTGGGAC AGGCCCAGAA GTACCTCGAC TATGTCAATA TCATGACTTA CGATCTGTAC CATGGCAACG ACAAAGTAAC GGGCCACCAC AGCCCCCTGT TTCAATCGGC CAAGGGCGAC CACTCCCGAA ACAGCAGCGC CGATGCCGTC GATGGGCACA TACGGGCGGG CGTACCGGCC AGCAAAATCG TGCTGGGCCT CCCTTTCTAC GGGCGAGGCT GGTCCGAAAC CCGCGATCAG GATAACGGAC TCTTTCAACC ATCGACGGGT AAACATTACT TTATCAGCTA CGATGAACTG ATGGCGAAGT ACATCAGCAA GAACGGGTAC ACCCGCTATT GGGACAACGA TGCCAAAGCC CCGTATCTCT GGAATCCAGA CTCGCGTACG TTCATCTCCT ACGCCGACCC CGAGTCGTTC ATTTACAAAG TTGAGTACGT AAAATCAAAG AAACTGGCCG GGGTGATGTT CTGGGAATAC ATTTATGACC TTCAGCAAAA AAGCATACTA CTGAACACAC TGGTCGGGGA ATTAAACAAA CAGAAGTAA
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Protein sequence | MKKVLPIVAL MLVLLGQNLL AQSAKSHPYV VIGYVTGSGW TKDQIEAQKL THINYAFGVP DEKGEIAPLT AKDGENLAKL TSLRANNKDL KILLSIGGWG GCKYFSDAAL NEASRQKFTN SAVAILKKHQ LDGIDIDWEY PDQIGAGNIY RPADKQNFTL FLKSLRDGLD KQGKLDKRTG KNHYLLTAAT GGDTAFVNHT ELGQAQKYLD YVNIMTYDLY HGNDKVTGHH SPLFQSAKGD HSRNSSADAV DGHIRAGVPA SKIVLGLPFY GRGWSETRDQ DNGLFQPSTG KHYFISYDEL MAKYISKNGY TRYWDNDAKA PYLWNPDSRT FISYADPESF IYKVEYVKSK KLAGVMFWEY IYDLQQKSIL LNTLVGELNK QK
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