Gene Slin_2268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2268 
Symbol 
ID8726009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2749520 
End bp2750668 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content51% 
IMG OID 
ProductChitinase 
Protein accessionYP_003387088 
Protein GI284037158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.149886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TTCTTCCTAT CGTTGCCCTT ATGCTGGTGC TGCTCGGGCA AAATCTGCTG 
GCTCAATCCG CAAAATCGCA TCCATATGTT GTCATTGGCT ACGTAACCGG CAGCGGCTGG
ACAAAAGATC AGATCGAAGC GCAGAAACTG ACCCACATCA ACTATGCATT CGGCGTTCCG
GACGAAAAAG GCGAAATCGC CCCGCTGACT GCCAAAGATG GCGAGAATCT GGCAAAGCTC
ACTTCCCTCA GAGCCAACAA TAAAGACCTC AAAATTTTAC TTTCCATTGG TGGCTGGGGC
GGCTGCAAAT ACTTTTCCGA TGCGGCTCTG AATGAGGCCT CCCGCCAAAA ATTTACGAAC
AGCGCCGTTG CGATCCTGAA AAAACACCAG CTCGATGGTA TCGATATCGA CTGGGAATAC
CCCGATCAGA TTGGTGCCGG GAATATCTAC CGCCCCGCCG ATAAACAAAA CTTTACCCTG
TTTCTGAAAT CCCTGCGGGA TGGGCTGGAT AAACAAGGGA AGCTGGACAA GCGCACGGGT
AAAAATCACT ACCTGCTCAC AGCCGCCACT GGTGGCGACA CGGCTTTTGT GAACCATACG
GAATTGGGAC AGGCCCAGAA GTACCTCGAC TATGTCAATA TCATGACTTA CGATCTGTAC
CATGGCAACG ACAAAGTAAC GGGCCACCAC AGCCCCCTGT TTCAATCGGC CAAGGGCGAC
CACTCCCGAA ACAGCAGCGC CGATGCCGTC GATGGGCACA TACGGGCGGG CGTACCGGCC
AGCAAAATCG TGCTGGGCCT CCCTTTCTAC GGGCGAGGCT GGTCCGAAAC CCGCGATCAG
GATAACGGAC TCTTTCAACC ATCGACGGGT AAACATTACT TTATCAGCTA CGATGAACTG
ATGGCGAAGT ACATCAGCAA GAACGGGTAC ACCCGCTATT GGGACAACGA TGCCAAAGCC
CCGTATCTCT GGAATCCAGA CTCGCGTACG TTCATCTCCT ACGCCGACCC CGAGTCGTTC
ATTTACAAAG TTGAGTACGT AAAATCAAAG AAACTGGCCG GGGTGATGTT CTGGGAATAC
ATTTATGACC TTCAGCAAAA AAGCATACTA CTGAACACAC TGGTCGGGGA ATTAAACAAA
CAGAAGTAA
 
Protein sequence
MKKVLPIVAL MLVLLGQNLL AQSAKSHPYV VIGYVTGSGW TKDQIEAQKL THINYAFGVP 
DEKGEIAPLT AKDGENLAKL TSLRANNKDL KILLSIGGWG GCKYFSDAAL NEASRQKFTN
SAVAILKKHQ LDGIDIDWEY PDQIGAGNIY RPADKQNFTL FLKSLRDGLD KQGKLDKRTG
KNHYLLTAAT GGDTAFVNHT ELGQAQKYLD YVNIMTYDLY HGNDKVTGHH SPLFQSAKGD
HSRNSSADAV DGHIRAGVPA SKIVLGLPFY GRGWSETRDQ DNGLFQPSTG KHYFISYDEL
MAKYISKNGY TRYWDNDAKA PYLWNPDSRT FISYADPESF IYKVEYVKSK KLAGVMFWEY
IYDLQQKSIL LNTLVGELNK QK