Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2254 |
Symbol | |
ID | 8725995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2726726 |
End bp | 2729215 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003387074 |
Protein GI | 284037144 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.254263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.520462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAACCCT TTACAACACA CGATTTCCAA CAGGCGAAAG CGAATCATTT ACTGTTTAAA CGTCAGTTGT CGGCTAGCTT ATACAACGAA ACAGCTGACC AAGACATTCG CATCCTGTCT CAATATGCCT GTACCCTTGG TCAATGGCTC TATAATCATG CCTTAATTGA CCACGAAGAA ATTGATGAAG TGTATGAATT GGAACAGGTT CACGCTTTAA TACATACCCA TAGCCGGGCG CTGCTGAAGA CGTACAATAC AGGGCATGTT GAGGAAGCCC GTCGGGGCCT TCCAGCGCTG GAGCAGGCAA CGGATCGACT CGTGGAATTG CTCGATACAC TCGAAAGAAA GCTTCTTCCC AATACCCCGC CAGCTCTGAA TCAGACAACT ATGCCGGGAC CGGAGATACT GCAGGACTTT TTTGTGCACT CACCGGTAAT CCACTGCATC CTCACCGGCC CCACGCATAT TTACTCGTTT GCCAACCCGG CCCATGACAC GTTGGTTGGG GGACGAAAGG TATTGGGAAA GCCTATTCGG GACGTGTTGC CCGAACTGGC TGATCAGGGG TTTTTCGAGT TGCTCGATGA GGTGTACACG CAATCGAAAC CCTATGTGGG CAGAGAAATG TCGATTATGC TGGCTAACGG CCACGGCATA AACCGGCAGG CATACCTAAA CTTTATTTAC CAGCCCATAA AAAACGCACT CGGCCAAACA GAAGGCATAC TGGCTTATGG AACTGACGTC ACGGAGCAAG TGGCCGCGCG AAAAAAAGTG GAAGAAAGTG AGGCCCGTTT CCGGGCGATC ATTGAAGAGG CTCCTGTGGC TACCTGTCTT TTTGTAGGCC CCGACATGCG CGTTGATGTA GCCAACGATT TAATGCTTCG CTACTGGGGT AAAGGCCGGT CTGTGTTGGG TCAACCCCTC ATAAAAGGAG TTCCCGAACT CGTGGGCCAG CCCTTTCCGG ACATTCTCGA CACGGTATTC ACAACAGGAA AAACCTACGA AGCCAAAGCT GCCCCGGTGG AACTCAGGCT GGATGGTGTT TTGGGCACAT ACTATTTTGA CTTTACCTAC AAGCCACTTT TCAATGAACA GGGGCAGGTA TACGCCATTA TTGACACGGC CGTTGATGTT ACCAATCAGG TGTTGGCGCA GCAGCAGCAG TTGCAGTTAG CCGCTATTGT GGAGAAGGTA CCCATCTACG TCACGATTAC CAGCCTGGAT GGCAATATTC AATACATCAA CCCTTTCGGT CAGCAATTGC TGGGCCTTAC CCCCGACGAA GTACGCACGA AGCACCTCCG TGACTTTTTT GTCGAAGAGG ATATGACTAT TCTGGGGAAC GAGGCCTTAC CGGCTTTACT GACCAGTCAT CACTGGGAAG GCAAACTGCA CATGCGCCAC TTTCAAACCG GCGAATTAAT CCCTTTTGAT ACAACCTCGC TGGCGCTCAC CGATCCAACT ACGGGTAATC TTGAGGCACT GGTTGCCGTT AACCGCGACC TGCGCCCCGA GCTTTTGTCA CTGGCGCAGC AGGATCAGAT CATGCAGGAA CTTAGAGCCA GTGAAGAACG CTACCGGCGT TTGTCCGCTC AACTGGAAGA GCAGGTAAAC GAGCGCACGG CAGAACTGGC CGCTATTAAT GAAGAGCTTG CCGCTACCAA CGAAGAACTG GCCGTCACCA ACGAAGAGTT AGCCTCTGCC AACGAGGAGT TTGCCGTTAC GAACGAAGAA CTGGAAGAAG CCAACCAATT GTTTAGCCGC TCCAACCAAA ACCTCGAACG ATTCGCTTAC ATTGCCAGTC ATGACTTGCA GGAACCCCTC CGCAAAGTTC AGCAGTTCGG CGATTTGCTA AGCGCTCAGT ACGGTTCTCA GTTGGGTGAA GGCATCATGT ACCTTGAGCG TATGCAGGCA GCCGCCACCC GCATGTCGAC CCTCATTCGG GACTTACTCA GCTTCTCCCG CATTTCCACC TGGCAGGACG TTACCGCCCT CGTTTCGCTA ACCAACGTGG TTGAGACTGT ACTCAATGAT CTGGAACTGC GTATTCAGGA AACCGGGGCC ATTATACAGG TAGAGCCTCT GCCCAACATT CAGGGCGACC GGTCGCAGTT GGAGCAGCTC TTTCAGAATT TACTGAGCAA TGCGCTGAAA TTCAGAAAGC CGAACCAGCC TCCCCAGATT CATATTCACT ACCAGGGCAT TAGCGCTAAA GACCTTCCTC CTACAGTAAA ACCAGCCCGG CAGGCACGGG CGTATTATCA GGTGCAGGTG TCGGACAATG GAATCGGCTT CGACGAAAAA TACGTGGACC GGATCTTTCA GATCTTTCAG CGCCTGCACG GCAAAAGTGA ATTTGCCGGG ACCGGCATCG GGCTGGCTAT CTGCGAGAAG GTTGTTACAA ACCATGGCGG AGCAATTATT GCCAACAGCG AGCCAGGCCA GGGTGCCACG TTCAGTATCT ATTTACCCGT CCAATCTTGA
|
Protein sequence | MKPFTTHDFQ QAKANHLLFK RQLSASLYNE TADQDIRILS QYACTLGQWL YNHALIDHEE IDEVYELEQV HALIHTHSRA LLKTYNTGHV EEARRGLPAL EQATDRLVEL LDTLERKLLP NTPPALNQTT MPGPEILQDF FVHSPVIHCI LTGPTHIYSF ANPAHDTLVG GRKVLGKPIR DVLPELADQG FFELLDEVYT QSKPYVGREM SIMLANGHGI NRQAYLNFIY QPIKNALGQT EGILAYGTDV TEQVAARKKV EESEARFRAI IEEAPVATCL FVGPDMRVDV ANDLMLRYWG KGRSVLGQPL IKGVPELVGQ PFPDILDTVF TTGKTYEAKA APVELRLDGV LGTYYFDFTY KPLFNEQGQV YAIIDTAVDV TNQVLAQQQQ LQLAAIVEKV PIYVTITSLD GNIQYINPFG QQLLGLTPDE VRTKHLRDFF VEEDMTILGN EALPALLTSH HWEGKLHMRH FQTGELIPFD TTSLALTDPT TGNLEALVAV NRDLRPELLS LAQQDQIMQE LRASEERYRR LSAQLEEQVN ERTAELAAIN EELAATNEEL AVTNEELASA NEEFAVTNEE LEEANQLFSR SNQNLERFAY IASHDLQEPL RKVQQFGDLL SAQYGSQLGE GIMYLERMQA AATRMSTLIR DLLSFSRIST WQDVTALVSL TNVVETVLND LELRIQETGA IIQVEPLPNI QGDRSQLEQL FQNLLSNALK FRKPNQPPQI HIHYQGISAK DLPPTVKPAR QARAYYQVQV SDNGIGFDEK YVDRIFQIFQ RLHGKSEFAG TGIGLAICEK VVTNHGGAII ANSEPGQGAT FSIYLPVQS
|
| |