Gene Slin_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2239 
Symbol 
ID8725979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2710080 
End bp2711081 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387059 
Protein GI284037129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGCTC TATTACAAAG TAACGTGTTC TCCTCTATTT TGTCGCTGAA ACCGGGTAAA 
AAAATCATCT TTTGGGCTAA AATAGCCGTG TTTTTGGCCC TCATCGGTTA CATCGTCCAT
GTTTTGCGCC AGCAACCGTT CGACTGGCCC CTTGTCAGCG CCCAGCTTCG GGCGGTCGAA
CACCCCGAAC GGTGGGCGTT GGGCTTAGTT GTTCTTACAC CGGTCAACTG GGGGCTCGAA
GCCTTGAAAT GGCAGATTCT GCTCCGGCGG GTTGTGCCTA CGGGGTTCTG GCAGGCGTAT
CAGGGGGTAC TGGCCGGTGT GTCGTTAGGC TTCGCTTTGC CGGCTCAACT GGGTGATACC
GCCGGACGGG TACTGTCGCT GCGCACCAAC CGGGCCGGTG CCATCGGGGC GTCACTGGTG
TCGGGTGGTA TGCAATTCTA TGTTGCTATA GTCTTTGGTA CCGTTGCCTG GGCGCAGCAC
CTTCGGCTGG TGTCTGAGCG CAACAACCAG ACCGGCCAAT GGCTGCTGGT TGTCCTCACA
TTGTTATCGC TGGGTGGGGT AGTGTTCGGT ATATGCCGTC GGCCGATGGT TTCGTTTCTG
GCGGGCCGTA CGGGCTTGAA CCGCTTTTCC GATTACTGGA AGGTGGCTGT TCAGTATTCC
GATTGGGAGA TCGTCCGGGC ACTGGCGGTT GCGGGGTTAC GGTATGTCGT TTTCTCGGGG
CAGTTTTATC TGGCCATGCG GCTGGTTGGA CTGGAATTAC CCCTGGTTTG GGCCGTATCG
GGTATTGGGC TGGTCTTTCT GGCAAAAACG ATCACCCCCG CATTTAATTT ACTGAGCGAT
CTGGGGGTTC GGGAAGCTGC TTCCTTATGG GTGTTTGCGC CCGTTGGTAG TTCGGCATCG
GTGTTAATAA CGGTCACCCT GACGCTCTGG GTAGCCAACG TCCTGACGCC CGTATTGGCT
GGCCTGATCT GGCTCTGGAA ACTCAAACTA ACCGCTGAAT GA
 
Protein sequence
MLALLQSNVF SSILSLKPGK KIIFWAKIAV FLALIGYIVH VLRQQPFDWP LVSAQLRAVE 
HPERWALGLV VLTPVNWGLE ALKWQILLRR VVPTGFWQAY QGVLAGVSLG FALPAQLGDT
AGRVLSLRTN RAGAIGASLV SGGMQFYVAI VFGTVAWAQH LRLVSERNNQ TGQWLLVVLT
LLSLGGVVFG ICRRPMVSFL AGRTGLNRFS DYWKVAVQYS DWEIVRALAV AGLRYVVFSG
QFYLAMRLVG LELPLVWAVS GIGLVFLAKT ITPAFNLLSD LGVREAASLW VFAPVGSSAS
VLITVTLTLW VANVLTPVLA GLIWLWKLKL TAE