Gene Slin_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2236 
Symbol 
ID8725976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2707201 
End bp2708232 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content53% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003387056 
Protein GI284037126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.92469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTTA CTAATACACC AGACTGGCCG CAATCCCGCC CGGGTAGTCC CCTGATCAGT 
ATCTTGATTG CCGCCAGAAA TGAAGAACAC GCCATTCTTA CCTGTCTGGA GGCTGTCAAC
CGCCTGAACT ACCCAACAGA TCAGCTGGAG GTGCTCATTG GCAATGACCA GTCTACCGAT
CAGACCGCTA CGCTGGTAGC CGGGTTCATT CAGGATAAGC CTGCCTTTCA ACTCATGGAT
ATCCGCGAGT CCGTCAGTGG GTTGCGCGGC AAGGCCAATG TGCTGGCACA GCTGGCTAAT
CAGGCTCGCG GCCAACTGTT TTTTTTTACC GATGCCGATA CGCAGGTTCC TCCCGACTGG
CTGATCGCTA TGGGGCATTC GTTTCAGAAG CGGACAGGTA TCGTAACGGG CGTTACCCTC
CCCGAAGGCC CGAACCTCTT TCATAAGCTT CAAACAGTCG ACTGGCTCTA CAACCTGACA
CTCACGCATC TGGTAAGTAG TATGGGGTTG CCGGTTACGG CTATGGGTAA TAACATGGCC
GTAAGTCGCG AGGGGTACCA CGCTGTTGGC GGATACGAGT CCCTGCCGTT TTCGGTTGTG
GAAGATTATG CGCTTTTTCG GGCCGTTGTC GCTAAAGGAT ATGGGTTTGC CAATTTGCTG
AATGCCGATG TGCTGGCCCG AACCAGGGCA GTGGATACCC TGGATGGGTT TCTTCATCAA
CGCAAACGCT GGATGCGGGG AGCGAGTCAA CTGCCAATCT GGATGGTTGG TTCGCTTTAC
GTTCAGTATC TGGCGGCACC TCTGTTTCTG CTACTGGGCT TGTTTTCGCC AACTTTAGCC
ATCGGTCTGT ATATCGCCAG ACTATTTGTG CAAACAACAA TCATTTCGTT CGGCCTAAGC
CGACTACGGC AGAGCGACTT ATGGCCTTAC GCGTTGTTAT TTGAGGTTTA CCAGCTTGTC
ATCGGGCCGC TGGCGGTACT TTTTTACCTC ATGCCGACGA AAATTGAGTG GAAAGGAAGG
ACATACAATT GA
 
Protein sequence
MPVTNTPDWP QSRPGSPLIS ILIAARNEEH AILTCLEAVN RLNYPTDQLE VLIGNDQSTD 
QTATLVAGFI QDKPAFQLMD IRESVSGLRG KANVLAQLAN QARGQLFFFT DADTQVPPDW
LIAMGHSFQK RTGIVTGVTL PEGPNLFHKL QTVDWLYNLT LTHLVSSMGL PVTAMGNNMA
VSREGYHAVG GYESLPFSVV EDYALFRAVV AKGYGFANLL NADVLARTRA VDTLDGFLHQ
RKRWMRGASQ LPIWMVGSLY VQYLAAPLFL LLGLFSPTLA IGLYIARLFV QTTIISFGLS
RLRQSDLWPY ALLFEVYQLV IGPLAVLFYL MPTKIEWKGR TYN