Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2236 |
Symbol | |
ID | 8725976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2707201 |
End bp | 2708232 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003387056 |
Protein GI | 284037126 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.92469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGTTA CTAATACACC AGACTGGCCG CAATCCCGCC CGGGTAGTCC CCTGATCAGT ATCTTGATTG CCGCCAGAAA TGAAGAACAC GCCATTCTTA CCTGTCTGGA GGCTGTCAAC CGCCTGAACT ACCCAACAGA TCAGCTGGAG GTGCTCATTG GCAATGACCA GTCTACCGAT CAGACCGCTA CGCTGGTAGC CGGGTTCATT CAGGATAAGC CTGCCTTTCA ACTCATGGAT ATCCGCGAGT CCGTCAGTGG GTTGCGCGGC AAGGCCAATG TGCTGGCACA GCTGGCTAAT CAGGCTCGCG GCCAACTGTT TTTTTTTACC GATGCCGATA CGCAGGTTCC TCCCGACTGG CTGATCGCTA TGGGGCATTC GTTTCAGAAG CGGACAGGTA TCGTAACGGG CGTTACCCTC CCCGAAGGCC CGAACCTCTT TCATAAGCTT CAAACAGTCG ACTGGCTCTA CAACCTGACA CTCACGCATC TGGTAAGTAG TATGGGGTTG CCGGTTACGG CTATGGGTAA TAACATGGCC GTAAGTCGCG AGGGGTACCA CGCTGTTGGC GGATACGAGT CCCTGCCGTT TTCGGTTGTG GAAGATTATG CGCTTTTTCG GGCCGTTGTC GCTAAAGGAT ATGGGTTTGC CAATTTGCTG AATGCCGATG TGCTGGCCCG AACCAGGGCA GTGGATACCC TGGATGGGTT TCTTCATCAA CGCAAACGCT GGATGCGGGG AGCGAGTCAA CTGCCAATCT GGATGGTTGG TTCGCTTTAC GTTCAGTATC TGGCGGCACC TCTGTTTCTG CTACTGGGCT TGTTTTCGCC AACTTTAGCC ATCGGTCTGT ATATCGCCAG ACTATTTGTG CAAACAACAA TCATTTCGTT CGGCCTAAGC CGACTACGGC AGAGCGACTT ATGGCCTTAC GCGTTGTTAT TTGAGGTTTA CCAGCTTGTC ATCGGGCCGC TGGCGGTACT TTTTTACCTC ATGCCGACGA AAATTGAGTG GAAAGGAAGG ACATACAATT GA
|
Protein sequence | MPVTNTPDWP QSRPGSPLIS ILIAARNEEH AILTCLEAVN RLNYPTDQLE VLIGNDQSTD QTATLVAGFI QDKPAFQLMD IRESVSGLRG KANVLAQLAN QARGQLFFFT DADTQVPPDW LIAMGHSFQK RTGIVTGVTL PEGPNLFHKL QTVDWLYNLT LTHLVSSMGL PVTAMGNNMA VSREGYHAVG GYESLPFSVV EDYALFRAVV AKGYGFANLL NADVLARTRA VDTLDGFLHQ RKRWMRGASQ LPIWMVGSLY VQYLAAPLFL LLGLFSPTLA IGLYIARLFV QTTIISFGLS RLRQSDLWPY ALLFEVYQLV IGPLAVLFYL MPTKIEWKGR TYN
|
| |