| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2227 |
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| Symbol | |
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| ID | 8725965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2695470 |
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| End bp | 2698184 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | DNA topoisomerase (ATP-hydrolyzing) |
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| Protein accession | YP_003387047 |
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| Protein GI | 284037117 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0006877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.213389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAACG AAGAAAATGA ACAACCGCTA GAGGACGATA ATCAGCAGCC AGAGGTTAAC
CCATCTGCCG AAGGCACCGA CCTGACTGAC GACCTTGTAC CGGAAGAGCA ACCAATTGAC
ACGAAAACTG AAGTGCTACA CGACCAGACG GTCGTGTCGG GCTTATACGA AAATTACTTT
CTTGATTATG CATCGTACGT CATCCTCGAA CGGGCGGTCC CAGCTGTAGA AGATGGACTG
AAACCTGTTC AGCGCCGGAT TCTTCATGCG CTGAAGGAGA TGGATGATGG TCGCTTTAAC
AAGGTGGCCA ACGTTATCGG GCAAACGATG CAGTTTCACC CCCATGGCGA TGCATCCATC
GGGGAAGCCC TGGTCAACAT CGGCCAGAAA GAACTGCTGT TTGATACGCA GGGTAGCTGG
GGCGATGTTC GCACCGGTGA TGGTGCCGCT GCTCCACGTT ATATTGAAGT ACGGCTGTCC
AAATTTGCGC AGGACGCCAT CTACAACGAC AAAACCACGG AGTGGCAACT GTCTTATGAT
GGTCGCAAAC GAGAGCCCAT AACTCTTCCT GTTAAGTTCC CACTGTTGCT GGCGCAGGGT
GTTGAGGGAA TTGCCGTTGG CCTGTCGACA AAGATACTGC CTCACAACTT CAATGAACTC
ATTGATGCGT CTATAAACAT CCTTAAAGAT AAACCCGTAT CGCTCTTTCC TGATTTTCAG
ACAGGAGGCC TGATCGATGT CAGCAACTAC AACGATGGGC ACCGGGGCGG CAAAGTCCGG
GTGCGGGCCA AAATTGAAGA AGTCGATAAA AAAATACTCG CCATTCGTGA CGTTCCCTAT
GGTGTGACAA CTTCCCAGTT GATCGACTCG ATTGTTAAAG CGGCTGAGTT AGGGAAAATC
CGCATCAAGG CACCCAGTCG CAATGTGGCA GCCGTTGTCG ACAACACCGC TAAAGACGTC
GAGATACTGG TTCATTTACA GCCCGGTGTT TCGCCCGATG TGACCATCGA CGCATTATAT
GCCTTTACCG ACTGTGAAGT CTCTATTTCG CCGAATGCCT GCGTTATCAT CGGCGATAAG
CCGCATTTTG TTAGTGTAAC GGACATTCTT CGGGTCAACA CGCATCAAAC GGTGCATTTG
CTGCAACGTG AGCTTGAGAT CCGGCGTAGT GAATTGATGG AGCGCTTGCT GTATAGCTCG
CTGGAAAAGA TATTCATCGA AAACCGGATT TATCGTAAAA TTGAGGAGTG CGAAACCTTT
GAGGCTGTGC TTGAAGCGAT AGACAAGGCG CTTAAGCCGC ACAAGAAGCT ATTTTATCGC
GTCATCACCC AGGACGACCT TATCCGGTTG ACGGAAATCA AAATTAAACG GATTTCAAAA
TACGATGGGT TCAAGGCCGA AGAGCTGATG CGTCGGCTGG AGCAGGAGCT GGCCGAAACG
GAGGATAACC TGGCCAACAT CACACGGTTT GCTATTGCCT ATTATAAAGA CCTGCAAAAA
AAATACGGCA AAGGCCGCGA GCGCAAAACG GAAATCCGGG CGTTCAACAC CATTGCCGCC
AGTGTGGTAG CCGCTGCCAA CCAAAAGCTG TATGTTGACC GCGAAGGTGG ATTTATTGGC
TATGGATTGA AAAAAGATGA ATACGTCAGC GATTGCTCCG ATATCGACGA TATCATTATT
TTCCGGCGTG ATGGAAAGTG TATGGTCGTT AAAATTGCGG AGAAAGTATT TGTCGGCAAG
GATATTGTAT ATGTTTCGGT GTTCAAGAAG AACGACGAGC GGAAGATTTA CAACCTGGTT
TATTTGGATG GAAAATCCGG TATATCCATG GCCAAGCGTT TTCCGGTTAC GGGTGTCACG
CGTGATCGGG AGTACGACCT GACAATGGGT AATCCGAAAT CCAAGCTAAC CTACTTTAGT
GCCAATGATA ATGGAGAGGC TGAGGTTATT ACGATAAATC TGACGGCTCA ATGCACCGCG
AAGATCAAAC AATTTGACTT CGATTTTGCA TCGGTTGGTA TCAAAAACCG GTCGGCTCAG
GGAAATATTT TAACCAAGTA CCCCGTTCGG AAAATAACCC AGAAATCGGG TGGTGTATCT
ACCCTGGGCG GTGTAGACAT CTGGTATGAT GAGCACCTCG GACGGCTTAA TCGGGATGAG
CGCGGTCGAC TATTGGGTAA CTTCGATGCG AAAGACTGTA TACTGGTCGT TTACAAAGAC
GGTCTGTATG AATTGACGAG TTTCGACCTG ACCAATCGGT ACGAGCCTAA CGAGATCGCT
ATTCTGGTCA AGTTCGAACC CGATACGGTT TTGTCGGCTG TGTATTACGA AGCTAACCAG
AAGGCCTGGT ATGTGAAGCG CTTTAAAGTT GAGACAACGA CTATCGATAA GAAGTTTAAT
TTCATTGGCG ACGTAAAAGG ATCGAAGAAT CTGGCTGTAA CCGCCGATCG ATATCCCCGA
ATCGAGATCA CCCATCAGGT GAAAGACCGG GGGCCACTTG AAAAGATGGT GCTGGAGCCG
GAGGGTTTTA TTGATATACG TGGCTGGAAA GCACTGGGTA AAATTCTACC TTTTGCCAAA
GTCAAAGACG TTAAATTGCT GGCACCAAAG GTTGTTAAAG AACCGGTTTC TCCTGAACTG
ATTATTGTTA CTGATCCTGT AACTGCTCCG GAGGCTGAAG AGAAAGAGTC GATACAGTTG
GGCTTATTCT CTTAA
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| Protein sequence | MINEENEQPL EDDNQQPEVN PSAEGTDLTD DLVPEEQPID TKTEVLHDQT VVSGLYENYF
LDYASYVILE RAVPAVEDGL KPVQRRILHA LKEMDDGRFN KVANVIGQTM QFHPHGDASI
GEALVNIGQK ELLFDTQGSW GDVRTGDGAA APRYIEVRLS KFAQDAIYND KTTEWQLSYD
GRKREPITLP VKFPLLLAQG VEGIAVGLST KILPHNFNEL IDASINILKD KPVSLFPDFQ
TGGLIDVSNY NDGHRGGKVR VRAKIEEVDK KILAIRDVPY GVTTSQLIDS IVKAAELGKI
RIKAPSRNVA AVVDNTAKDV EILVHLQPGV SPDVTIDALY AFTDCEVSIS PNACVIIGDK
PHFVSVTDIL RVNTHQTVHL LQRELEIRRS ELMERLLYSS LEKIFIENRI YRKIEECETF
EAVLEAIDKA LKPHKKLFYR VITQDDLIRL TEIKIKRISK YDGFKAEELM RRLEQELAET
EDNLANITRF AIAYYKDLQK KYGKGRERKT EIRAFNTIAA SVVAAANQKL YVDREGGFIG
YGLKKDEYVS DCSDIDDIII FRRDGKCMVV KIAEKVFVGK DIVYVSVFKK NDERKIYNLV
YLDGKSGISM AKRFPVTGVT RDREYDLTMG NPKSKLTYFS ANDNGEAEVI TINLTAQCTA
KIKQFDFDFA SVGIKNRSAQ GNILTKYPVR KITQKSGGVS TLGGVDIWYD EHLGRLNRDE
RGRLLGNFDA KDCILVVYKD GLYELTSFDL TNRYEPNEIA ILVKFEPDTV LSAVYYEANQ
KAWYVKRFKV ETTTIDKKFN FIGDVKGSKN LAVTADRYPR IEITHQVKDR GPLEKMVLEP
EGFIDIRGWK ALGKILPFAK VKDVKLLAPK VVKEPVSPEL IIVTDPVTAP EAEEKESIQL
GLFS
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