Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2226 |
Symbol | |
ID | 8725964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2694675 |
End bp | 2695343 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | protein of unknown function DUF218 |
Protein accession | YP_003387046 |
Protein GI | 284037116 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0993936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.236375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGCG AAGCGGCTGG AGTCCGTGCG GTCAAGCGTG TTATTAAATT GACAATTGCT TTGGTGTTTA TTGGGGCGAC CGTAGTGCTG GTTAGCAACT GGTGGGTCGT TTATAATACC CGAAACCAGA TTTATTTTGA CATTCACGAG TTACCTGCCA ATGATGTGGG GCTTGTGTTG GGAACAAGTA AGTTTGTCCG GACAGGTAAG GAGAATCTGT TTTTCCGGTA TCGAATGGAG GCCACCGCCC GGCTCTGGAA AGAAGGTAAA GTGAAATACC TTATTCTGAG CGGTAATAAT GACTCAGAAT ACTACAACGA ACCCGTCGAT ATGCAGCGGG CATTGGTTAA ACTGGGGATT CCGGCGTCGG TAATGACACT CGATTATGCC GGTTACCGAA CCTTCGATTC GGTCGTACGT TGCAAGGACG TGTTTAACCA GGAAAAGATT ACGATTATCT CCCAAAACTT CCACAATGCA CGGGCCCTCT ACATTGGTAA CCACGAGGGG ATAGAGGCCA TTGCCTTTGC CGCTCAGGAT GTGCCCGACG GGTACTCATT CCGTACGCTG ATTCGGGAGT ACCTCGCTCG TCCCTACGCA CTCCTCGACG TGTACCTGCT TCGTCCCCAG CCCGAAAAAG GCAACTGGGA ACGGAAGCGT AATTCCTGA
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Protein sequence | MPREAAGVRA VKRVIKLTIA LVFIGATVVL VSNWWVVYNT RNQIYFDIHE LPANDVGLVL GTSKFVRTGK ENLFFRYRME ATARLWKEGK VKYLILSGNN DSEYYNEPVD MQRALVKLGI PASVMTLDYA GYRTFDSVVR CKDVFNQEKI TIISQNFHNA RALYIGNHEG IEAIAFAAQD VPDGYSFRTL IREYLARPYA LLDVYLLRPQ PEKGNWERKR NS
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