Gene Slin_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2226 
Symbol 
ID8725964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2694675 
End bp2695343 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function DUF218 
Protein accessionYP_003387046 
Protein GI284037116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0993936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.236375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCG AAGCGGCTGG AGTCCGTGCG GTCAAGCGTG TTATTAAATT GACAATTGCT 
TTGGTGTTTA TTGGGGCGAC CGTAGTGCTG GTTAGCAACT GGTGGGTCGT TTATAATACC
CGAAACCAGA TTTATTTTGA CATTCACGAG TTACCTGCCA ATGATGTGGG GCTTGTGTTG
GGAACAAGTA AGTTTGTCCG GACAGGTAAG GAGAATCTGT TTTTCCGGTA TCGAATGGAG
GCCACCGCCC GGCTCTGGAA AGAAGGTAAA GTGAAATACC TTATTCTGAG CGGTAATAAT
GACTCAGAAT ACTACAACGA ACCCGTCGAT ATGCAGCGGG CATTGGTTAA ACTGGGGATT
CCGGCGTCGG TAATGACACT CGATTATGCC GGTTACCGAA CCTTCGATTC GGTCGTACGT
TGCAAGGACG TGTTTAACCA GGAAAAGATT ACGATTATCT CCCAAAACTT CCACAATGCA
CGGGCCCTCT ACATTGGTAA CCACGAGGGG ATAGAGGCCA TTGCCTTTGC CGCTCAGGAT
GTGCCCGACG GGTACTCATT CCGTACGCTG ATTCGGGAGT ACCTCGCTCG TCCCTACGCA
CTCCTCGACG TGTACCTGCT TCGTCCCCAG CCCGAAAAAG GCAACTGGGA ACGGAAGCGT
AATTCCTGA
 
Protein sequence
MPREAAGVRA VKRVIKLTIA LVFIGATVVL VSNWWVVYNT RNQIYFDIHE LPANDVGLVL 
GTSKFVRTGK ENLFFRYRME ATARLWKEGK VKYLILSGNN DSEYYNEPVD MQRALVKLGI
PASVMTLDYA GYRTFDSVVR CKDVFNQEKI TIISQNFHNA RALYIGNHEG IEAIAFAAQD
VPDGYSFRTL IREYLARPYA LLDVYLLRPQ PEKGNWERKR NS