| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2220 |
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| Symbol | |
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| ID | 8725958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 2690481 |
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| End bp | 2691773 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003387041 |
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| Protein GI | 284037111 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.13078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA GTGAAGAGCG AAGGAGTGCA AGACTGAGAG AGCGTTTTAC CCCAGCTGGA
ATTCGCTCGT TCAGCCTTTC ATTCGTTCGC TCTTTCGTTT TATCGCTGGC CGTTTTAAGC
TTAGTAGTTG CCTGTAGCAG CGATGACCGG CAGTCGGCTC GCATACCGGA CTACCCAAAG
CCGGGCGACA GCAGCCGGAT TGAAGGCGCT TTGCGGGCAC TGACACTGGC CATCAACCAG
TCGTCACCGG CATCCGCCTA CGCCAAGCGG GCTGTCATCC TGCTGGCTAT GGGCAGGTTG
AATGAGGCAT TGGCCGACAT CGACGAGGCC ATCAGCCGAA ATGATAATTT AGGGTCGTAT
TATCTGACCC GCGCACAGGT GTTAAGGGCT TTACAACAGC CAGCCAAAGC ACTTCAGAAT
GCGCAGCGGG CCGAGATTCT GGGTGTCGAC ACCCCCGAGT TATACACATT ACAGGGCGAT
TTATTGCAAC GGCAGAATCA GTTCGATAAA GCAAAGCTCT ACATAGCCAA AGCGCTGCAA
ATGGCGCCCT ACGATGGCGA AGCTTACTTT TATAAAGGGC TGATGGCCGC TCGGCAGGGG
GACACAATAC AAGCTCTGGC CTTGTATCAG CATTCGCTCC GCCTGAAACC CCGCTATTTG
GAGACGTACA ACCAACTGGC GTCCATCTAC CGCACCACGG GTGATCTCAA CTCTGCTTTG
GTTTATAATG GACAGGCGTT ACGTTACTTC CCGAACAATC CCCGGCTATA TTACGGTCGC
GGGCTTATTT ACCATACGGA GGGTAAGCTC GATAGTGCCA TCGTCTATTA TCAGCAAACG
ATGAAGGTGC AGCCGGGGTA TTATCAAGCC TATTTTCAGA TGGGGCTGAT CAATCAGAAG
TTTCGGAACT ACTACGCAGC CCTAAACAAT TACCAGCGGG TGCAGGAGTT ACGGCCTCAG
TTCCCACGGA TTGATACCTA CATTGGATAT TGCCACGAGC AGATGGGTCA ATACGATCTG
GCCATAGCTG CCTATACCAA AGCAACCCAG CTAAACATTG CCGACAGGCA GGCCGCTGCG
GGTTTGTGGC GTTCTCAACG GAGGCAGTAT GCGCAAAACT CGTATAACTC CTTATTTTTG
TCGGATACGG CTGGCAAATC ATCGAGTCAG AATCGAAACC GAACTGAAAT TGATACCACG
CGTGTGCGTA TTTCAACTAT ACAGCCAAAA GCCCGCGTGA CAACCAATGC CGGCGATTCG
CTGCAGCGAA CCGTTAAACC AATTAACAAA TAA
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| Protein sequence | MKNSEERRSA RLRERFTPAG IRSFSLSFVR SFVLSLAVLS LVVACSSDDR QSARIPDYPK
PGDSSRIEGA LRALTLAINQ SSPASAYAKR AVILLAMGRL NEALADIDEA ISRNDNLGSY
YLTRAQVLRA LQQPAKALQN AQRAEILGVD TPELYTLQGD LLQRQNQFDK AKLYIAKALQ
MAPYDGEAYF YKGLMAARQG DTIQALALYQ HSLRLKPRYL ETYNQLASIY RTTGDLNSAL
VYNGQALRYF PNNPRLYYGR GLIYHTEGKL DSAIVYYQQT MKVQPGYYQA YFQMGLINQK
FRNYYAALNN YQRVQELRPQ FPRIDTYIGY CHEQMGQYDL AIAAYTKATQ LNIADRQAAA
GLWRSQRRQY AQNSYNSLFL SDTAGKSSSQ NRNRTEIDTT RVRISTIQPK ARVTTNAGDS
LQRTVKPINK
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