Gene Slin_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2212 
Symbol 
ID8725950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2682805 
End bp2684739 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content52% 
IMG OID 
Productchaperone protein DnaK 
Protein accessionYP_003387033 
Protein GI284037103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.162139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.02417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAA TTATTGGTAT TGACTTAGGC ACCACGAACT CGTGCGTGGC CGTGATGGAA 
GGCAACGAGC CGGTCGTAAT TCCTAACTCC GAAGGAGCCC GGACTACACC CTCGGTAGTC
GCATTTATGG ACAACGGCAA CGGCGAACGC AAAGTAGGCG CTCCCGCCAA ACGCCAGGCC
ATCACCAACC CCAAAAATAC GATCTCGTCG ATTAAGCGTT TCATGGGTAA ACGTTACGGC
GAAGTAACGA ACGAAATTAA AAACGTCGCT TATGACGTTG AAAACGGCCC GAACAATACG
CCCCGCGTTC GCATCGGTGA TCGTCAATAT ACGCCACAGG AGCTTTCAGC CCTTATTCTG
CAAAAGATGA AGCAGACTGC TGAAGACTAC CTCGGCCAAA CCGTAACGGA AGCCGTTATC
ACGGTACCTG CTTACTTTAA CGATGCCGAA CGTCAGGCTA CTAAAGAAGC CGGTGCTATT
GCCGGTCTGG ACGTAAAACG GATCATCAAC GAGCCAACAG CCGCAGCCCT GGCATACGGT
CTGGACAAAA CAAACAATGA TCAGAAAATT GCCGTATTCG ACCTCGGTGG TGGTACGTTC
GATATTTCGA TTCTGGAATT GGGAGACGGC GTATTTGAAG TTAAATCGAC CGATGGTGAT
ACACACTTAG GTGGTGATGA CTTCGATCAG GTAATCATCG ACTGGCTCGC CGACGAATTC
AAAAAGGATG AAGCGATAGA TCTGCGTCAG GACCCAATGG CCCTGCAGCG CCTGAAAGAA
GCGGCTGAAA AAGCAAAAGT TGAGCTGTCA AGCTCGAACT CGACCGAAAT CAACCTGCCG
TACATCATGC CGGTGAATGG TATCCCCAAA CACCTGGTTC GTACGCTAAG CCGCGCGAAA
TTTGAGCAAC TAGCCGATTC ACTGATTCAG CGTAGTCTTG AGCCTTGCCG TCGTGCCCTG
AAAAACGCCA GTCTGTCGGC CAGTCAGATC GACGAAGTGA TTCTGGTGGG TGGTTCGACC
CGGATTCCGA AAGTACAGGA AGAAGTTGAA AAACTGTTCG GCCGCAAGCC GTCCAAAGCC
GTTAACCCCG ACGAAGCCGT AGCCATTGGT GCTGCTATTC AGGGTGGTGT GTTGACGGGT
GAAGTGAAAG ACGTACTTCT GCTCGACGTT ATCCCGCTTT CGCTGGGTAT CGAAACGATG
GGTGGCGTAT TCACGAAAAT GGTGGATGCC AACACGACGA TTCCAAGCAA GAAAGTTGAA
GTGTATTCGA CGGCTTCGGA TAACCAGCCA AGCGTAGAAA TTAACATCCT ACAGGGTGAG
CGCCCAATGG CAGCTCAGAA CCGTCAACTC GGTCGGTTTA TTCTGTCGGA TATTCCACCA
GCACCCCGTG GCGTTCCACA AATCGAAGTG ACTTTCGACG TCGACGCCAA TGGTATCCTG
CACGTAACGG CTAAAGATAA AGGCACGGGT AAAGAGCAGA AAATCCGGAT TGAAGCATCG
AGCGGTTTGA CCGAAGCCGA AATTAATCGG ATGCGCGAAG AAGCCAAAGC CAACGAAGCT
GCCGACAAAG CGGAGCGAGA AGCTGTTGAG AAAGTCAATG CGGCCGACTC GATGATTTTC
CAGACCGAGA AGCAGTTAAA AGAATACGGC GACAAGTTGT CGGAAGGCAA CAAGTCAGCC
ATTGAAGCGG CTCTTGCTGA ACTCCGCACC GCACACGGTG CCCGCGACGC AGCCGCCATC
GACAAAGCGC TTGAAGGATT GAACGCAGCC TGGACAACGG CTTCTACAGA AATGTACAGC
GCTACCAACG GCGCAGGTGC CAACCCAATG GACGGTGCCG GTTTCGGTGG AGATGGTAGT
AACGGTTCAG CCAACGGCCA GGGCCAGCCC GCCGGTGATA ACGTTTCGGA CGTACCTTAC
GAAGAGGTTA AGTGA
 
Protein sequence
MGKIIGIDLG TTNSCVAVME GNEPVVIPNS EGARTTPSVV AFMDNGNGER KVGAPAKRQA 
ITNPKNTISS IKRFMGKRYG EVTNEIKNVA YDVENGPNNT PRVRIGDRQY TPQELSALIL
QKMKQTAEDY LGQTVTEAVI TVPAYFNDAE RQATKEAGAI AGLDVKRIIN EPTAAALAYG
LDKTNNDQKI AVFDLGGGTF DISILELGDG VFEVKSTDGD THLGGDDFDQ VIIDWLADEF
KKDEAIDLRQ DPMALQRLKE AAEKAKVELS SSNSTEINLP YIMPVNGIPK HLVRTLSRAK
FEQLADSLIQ RSLEPCRRAL KNASLSASQI DEVILVGGST RIPKVQEEVE KLFGRKPSKA
VNPDEAVAIG AAIQGGVLTG EVKDVLLLDV IPLSLGIETM GGVFTKMVDA NTTIPSKKVE
VYSTASDNQP SVEINILQGE RPMAAQNRQL GRFILSDIPP APRGVPQIEV TFDVDANGIL
HVTAKDKGTG KEQKIRIEAS SGLTEAEINR MREEAKANEA ADKAEREAVE KVNAADSMIF
QTEKQLKEYG DKLSEGNKSA IEAALAELRT AHGARDAAAI DKALEGLNAA WTTASTEMYS
ATNGAGANPM DGAGFGGDGS NGSANGQGQP AGDNVSDVPY EEVK