Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2212 |
Symbol | |
ID | 8725950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2682805 |
End bp | 2684739 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | chaperone protein DnaK |
Protein accession | YP_003387033 |
Protein GI | 284037103 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.162139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.02417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAA TTATTGGTAT TGACTTAGGC ACCACGAACT CGTGCGTGGC CGTGATGGAA GGCAACGAGC CGGTCGTAAT TCCTAACTCC GAAGGAGCCC GGACTACACC CTCGGTAGTC GCATTTATGG ACAACGGCAA CGGCGAACGC AAAGTAGGCG CTCCCGCCAA ACGCCAGGCC ATCACCAACC CCAAAAATAC GATCTCGTCG ATTAAGCGTT TCATGGGTAA ACGTTACGGC GAAGTAACGA ACGAAATTAA AAACGTCGCT TATGACGTTG AAAACGGCCC GAACAATACG CCCCGCGTTC GCATCGGTGA TCGTCAATAT ACGCCACAGG AGCTTTCAGC CCTTATTCTG CAAAAGATGA AGCAGACTGC TGAAGACTAC CTCGGCCAAA CCGTAACGGA AGCCGTTATC ACGGTACCTG CTTACTTTAA CGATGCCGAA CGTCAGGCTA CTAAAGAAGC CGGTGCTATT GCCGGTCTGG ACGTAAAACG GATCATCAAC GAGCCAACAG CCGCAGCCCT GGCATACGGT CTGGACAAAA CAAACAATGA TCAGAAAATT GCCGTATTCG ACCTCGGTGG TGGTACGTTC GATATTTCGA TTCTGGAATT GGGAGACGGC GTATTTGAAG TTAAATCGAC CGATGGTGAT ACACACTTAG GTGGTGATGA CTTCGATCAG GTAATCATCG ACTGGCTCGC CGACGAATTC AAAAAGGATG AAGCGATAGA TCTGCGTCAG GACCCAATGG CCCTGCAGCG CCTGAAAGAA GCGGCTGAAA AAGCAAAAGT TGAGCTGTCA AGCTCGAACT CGACCGAAAT CAACCTGCCG TACATCATGC CGGTGAATGG TATCCCCAAA CACCTGGTTC GTACGCTAAG CCGCGCGAAA TTTGAGCAAC TAGCCGATTC ACTGATTCAG CGTAGTCTTG AGCCTTGCCG TCGTGCCCTG AAAAACGCCA GTCTGTCGGC CAGTCAGATC GACGAAGTGA TTCTGGTGGG TGGTTCGACC CGGATTCCGA AAGTACAGGA AGAAGTTGAA AAACTGTTCG GCCGCAAGCC GTCCAAAGCC GTTAACCCCG ACGAAGCCGT AGCCATTGGT GCTGCTATTC AGGGTGGTGT GTTGACGGGT GAAGTGAAAG ACGTACTTCT GCTCGACGTT ATCCCGCTTT CGCTGGGTAT CGAAACGATG GGTGGCGTAT TCACGAAAAT GGTGGATGCC AACACGACGA TTCCAAGCAA GAAAGTTGAA GTGTATTCGA CGGCTTCGGA TAACCAGCCA AGCGTAGAAA TTAACATCCT ACAGGGTGAG CGCCCAATGG CAGCTCAGAA CCGTCAACTC GGTCGGTTTA TTCTGTCGGA TATTCCACCA GCACCCCGTG GCGTTCCACA AATCGAAGTG ACTTTCGACG TCGACGCCAA TGGTATCCTG CACGTAACGG CTAAAGATAA AGGCACGGGT AAAGAGCAGA AAATCCGGAT TGAAGCATCG AGCGGTTTGA CCGAAGCCGA AATTAATCGG ATGCGCGAAG AAGCCAAAGC CAACGAAGCT GCCGACAAAG CGGAGCGAGA AGCTGTTGAG AAAGTCAATG CGGCCGACTC GATGATTTTC CAGACCGAGA AGCAGTTAAA AGAATACGGC GACAAGTTGT CGGAAGGCAA CAAGTCAGCC ATTGAAGCGG CTCTTGCTGA ACTCCGCACC GCACACGGTG CCCGCGACGC AGCCGCCATC GACAAAGCGC TTGAAGGATT GAACGCAGCC TGGACAACGG CTTCTACAGA AATGTACAGC GCTACCAACG GCGCAGGTGC CAACCCAATG GACGGTGCCG GTTTCGGTGG AGATGGTAGT AACGGTTCAG CCAACGGCCA GGGCCAGCCC GCCGGTGATA ACGTTTCGGA CGTACCTTAC GAAGAGGTTA AGTGA
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Protein sequence | MGKIIGIDLG TTNSCVAVME GNEPVVIPNS EGARTTPSVV AFMDNGNGER KVGAPAKRQA ITNPKNTISS IKRFMGKRYG EVTNEIKNVA YDVENGPNNT PRVRIGDRQY TPQELSALIL QKMKQTAEDY LGQTVTEAVI TVPAYFNDAE RQATKEAGAI AGLDVKRIIN EPTAAALAYG LDKTNNDQKI AVFDLGGGTF DISILELGDG VFEVKSTDGD THLGGDDFDQ VIIDWLADEF KKDEAIDLRQ DPMALQRLKE AAEKAKVELS SSNSTEINLP YIMPVNGIPK HLVRTLSRAK FEQLADSLIQ RSLEPCRRAL KNASLSASQI DEVILVGGST RIPKVQEEVE KLFGRKPSKA VNPDEAVAIG AAIQGGVLTG EVKDVLLLDV IPLSLGIETM GGVFTKMVDA NTTIPSKKVE VYSTASDNQP SVEINILQGE RPMAAQNRQL GRFILSDIPP APRGVPQIEV TFDVDANGIL HVTAKDKGTG KEQKIRIEAS SGLTEAEINR MREEAKANEA ADKAEREAVE KVNAADSMIF QTEKQLKEYG DKLSEGNKSA IEAALAELRT AHGARDAAAI DKALEGLNAA WTTASTEMYS ATNGAGANPM DGAGFGGDGS NGSANGQGQP AGDNVSDVPY EEVK
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