Gene Slin_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2210 
Symbol 
ID8725948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2679680 
End bp2680345 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content49% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003387031 
Protein GI284037101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00455712 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGTTA TAAACTGGAA TATGCAAGGT GCAAGCTATT CTACAGAAAA TAAGTGGAAT 
AGCGGCGTAC TTCCTTTTTT TGCTCAATAT AATGCCGACA TCTGCTTGCT GCAAGAGTGC
GGAGCCATAC CTGCTTCCGC CATTCTTCAG ACGGCCAATG TCAACGGTAT TATTAACCTG
AATTTATACA CTTGGGGCAC GGACCGCTCA AACAAGTACA TCCTTTTTTA TCCGGCAGAC
CCTCGTGGTA ATCGTTGCAA TCTGGCCGTG GTATCCAATG TGCCGCCCAC TAATTGCGGA
TTTATTCTGT CAGCGACAGT CCCGACCTGG CGTCCGATTA TTGGGGTGGT CATTGGCGGA
ATATTCTTCG GTTCAATCCA CGCCATTAGC CCCAACGGTC CTGATGCCCA GGGACTACTA
AACCAAGTGG CTGCATTTGC CGGGGGAATT GGTATCCCTT GGGTAGTAGG CGGAGATTAC
AACCGCCTGC CGGGTACAAT GGCTCCGTTC GGTTGGATCG TGAACCCGCC CAACTACCCT
ACCTATCCAG CTACTGCACC ACTAAACGCG CTGGATTTCA GCGTAAAAAG TGTTGGGACA
TCAATTATCG GGAGGGTGCT AGCCTTGCAG ATGTCCGACC ACTTACCAGT ATCTTACACT
TACTAA
 
Protein sequence
MIVINWNMQG ASYSTENKWN SGVLPFFAQY NADICLLQEC GAIPASAILQ TANVNGIINL 
NLYTWGTDRS NKYILFYPAD PRGNRCNLAV VSNVPPTNCG FILSATVPTW RPIIGVVIGG
IFFGSIHAIS PNGPDAQGLL NQVAAFAGGI GIPWVVGGDY NRLPGTMAPF GWIVNPPNYP
TYPATAPLNA LDFSVKSVGT SIIGRVLALQ MSDHLPVSYT Y