Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2210 |
Symbol | |
ID | 8725948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2679680 |
End bp | 2680345 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003387031 |
Protein GI | 284037101 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00455712 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGTTA TAAACTGGAA TATGCAAGGT GCAAGCTATT CTACAGAAAA TAAGTGGAAT AGCGGCGTAC TTCCTTTTTT TGCTCAATAT AATGCCGACA TCTGCTTGCT GCAAGAGTGC GGAGCCATAC CTGCTTCCGC CATTCTTCAG ACGGCCAATG TCAACGGTAT TATTAACCTG AATTTATACA CTTGGGGCAC GGACCGCTCA AACAAGTACA TCCTTTTTTA TCCGGCAGAC CCTCGTGGTA ATCGTTGCAA TCTGGCCGTG GTATCCAATG TGCCGCCCAC TAATTGCGGA TTTATTCTGT CAGCGACAGT CCCGACCTGG CGTCCGATTA TTGGGGTGGT CATTGGCGGA ATATTCTTCG GTTCAATCCA CGCCATTAGC CCCAACGGTC CTGATGCCCA GGGACTACTA AACCAAGTGG CTGCATTTGC CGGGGGAATT GGTATCCCTT GGGTAGTAGG CGGAGATTAC AACCGCCTGC CGGGTACAAT GGCTCCGTTC GGTTGGATCG TGAACCCGCC CAACTACCCT ACCTATCCAG CTACTGCACC ACTAAACGCG CTGGATTTCA GCGTAAAAAG TGTTGGGACA TCAATTATCG GGAGGGTGCT AGCCTTGCAG ATGTCCGACC ACTTACCAGT ATCTTACACT TACTAA
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Protein sequence | MIVINWNMQG ASYSTENKWN SGVLPFFAQY NADICLLQEC GAIPASAILQ TANVNGIINL NLYTWGTDRS NKYILFYPAD PRGNRCNLAV VSNVPPTNCG FILSATVPTW RPIIGVVIGG IFFGSIHAIS PNGPDAQGLL NQVAAFAGGI GIPWVVGGDY NRLPGTMAPF GWIVNPPNYP TYPATAPLNA LDFSVKSVGT SIIGRVLALQ MSDHLPVSYT Y
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