Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2200 |
Symbol | |
ID | 8725938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2666518 |
End bp | 2668554 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003387021 |
Protein GI | 284037091 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.541226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00764394 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAAAAA AAGCTAACCA TACGAAGAGC CAAATCCTAC TAACCCAGCC AGTCGGCACG GGCTCACTAG AGAAGGGCTT TCTAACGGCT CATGAGCTGT GGGCCTTGAT TGAACCCCTT GCCCAGGCCG TCTGGGAGAC CGATGCCAAC GGCCAGGTCA GAGTCGATTC GCCTACCTGG CGCGCTTACA CGGGCCAGAG CCTAGGGGAT TGGCTGGGAG AAGGTTGGGG AAGCGCGGTG CACCCCCATG ACCGGGACTA TGCCCTGAGT CAATGGCAGC AAGCCGTCCG CCACCGAACG CCGGTCAACG CTGAATTTCG GATTGCCAGT CCCGATGGCT CCTGGCAATG GACCAACGTA AGGGCCATAC CCGTGTACCA AGCCGACGGC ACCGTGGGGA AATGGATTGG CCTCAACCTG GACATCCAAG ACCGCAAACG AGCCGAACAA ACGCGCCGTA AAAGTGAAGA AAGCCTTATG GCAGCGGCTA TGGGCACCTA CGTGTGGTAC GTGGAGGAAG ATCGGGGGGA GCCCGATGAG CAGATGCTTC AGCTGTTCGG CTTGCCACCT GAGGGGACGC TGAATTTGAC GGCGGCGCTC AACTCGTTGA TTCACCCCCA GGATGTTCCC GCTTACATGC AGGCAGTCAA GCAGGCTGCC GACCCTGTGG GAAACGGTCA ACTGCGGCAG GACATTCGGG TCATTCAGCC CAGCGGTCAG ACCCGATGGC TTTCCATTCG GGGGCAAATG TTCTTTAGGG GCATGCCTCG CCAGGCGAAC CGCCTGGTGG GATCGGCGAT TGACATCACC GACCGCAAGG TAGCCGAAGA AGCCCTGCGC GAGTCAGAAA CGCAGTTTCG ACTCATGGCC GATACAATAC CCCAAATCAT TTGGTGGTTT GATGCGGACG GACGGAATGA GTTCTTTAAT AAACCCTGGT ATCACTACAC CGGGGCCACC AGCCAGCCCC TGACCGCTGA AGAAGTGACC CACCGCTTTA TCCATCCTCA GGACCGACCG CTCACCCTGG CCGCTTTTGC GCAAGCCCGT CAACAGGGCC TTGCTTACCA GGTGGAGCAC CGTATCCAGT CGGCCGCCGG GACGTATCGT TGGTTTCTGG TGCGGGCGGA GCCCTACCGG GATCCGCAGA CGGGGGCCAT TACGCGCTGG TTTGGCGCCT CGGTCGATAT AGATGACCGT AAACTGGCCG AAGAAGCCCT GCTTCACAGC GAAGCGGGCT ACCGTGAGCT GTCCACCAAA CTGGAACAAC AGGTCCAACA GCGGACTCAG CAATTACAAG CGTCCGTTGT CGACTTGCAA CGCTCCAACG AGAACTTACA GCAGTTTGCC TACGTGGCCA GTCACGACCT GCAGGAGCCC CTGCGCAAGA TCCAGCAGTT TGGCGATTTG CTAAAGAGTC AGTATGCCCA GACGAGTGGT GAGGCGTTGG TTTATTTGGA GCGGATGCAA TCGGCGGCCG CTCGCATGTC CGTATTGATC AAAGCTCTGC TGAACTTTTC CCAGATTGCT AACCAGCAGG ATACTCGGAT ACCCGTCTCG TTGGCGCAAG TGGTGAGAGA CGTTTTAAGC GATATAGACC TGCTTCGGAC GGAGACCCAA GCCCGGATTG AGGTAGCACC CTTACCGGTG GTCGAGGGGG ACGCCCGGCA GTTAGGCCAA TTATTTCAGA ATCTACTGGG CAATGCCCTC AAGTTTCGCC GTAGGGATAC GCCTCCGGTG ATTCAGGTGA AGTCGGAACG GGTCATCAGG CATGAGCTAC CGGCGGGGGT CAAGCCTGCC CGGCAGGTGG AGGCCTACTA CCAGATTGAG GTGATTGACA ATGGCATTGG CTTTGAGGAG CAGTATGTGG ACCGCATCTT CCAAATCTTC CAGCGGCTGC ACGGCAAGAG CGCCTACGCG GGTACGGGCA TTGGCCTGGC GATCTGTGAG AAGGTGGTGG CCAATCATGG GGGGGCGATT ACGGCCACCA GCCAACCGGG TCAGGGCGCC ACCTTTACGA TTTACCTGCC TGCGTAG
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Protein sequence | MPKKANHTKS QILLTQPVGT GSLEKGFLTA HELWALIEPL AQAVWETDAN GQVRVDSPTW RAYTGQSLGD WLGEGWGSAV HPHDRDYALS QWQQAVRHRT PVNAEFRIAS PDGSWQWTNV RAIPVYQADG TVGKWIGLNL DIQDRKRAEQ TRRKSEESLM AAAMGTYVWY VEEDRGEPDE QMLQLFGLPP EGTLNLTAAL NSLIHPQDVP AYMQAVKQAA DPVGNGQLRQ DIRVIQPSGQ TRWLSIRGQM FFRGMPRQAN RLVGSAIDIT DRKVAEEALR ESETQFRLMA DTIPQIIWWF DADGRNEFFN KPWYHYTGAT SQPLTAEEVT HRFIHPQDRP LTLAAFAQAR QQGLAYQVEH RIQSAAGTYR WFLVRAEPYR DPQTGAITRW FGASVDIDDR KLAEEALLHS EAGYRELSTK LEQQVQQRTQ QLQASVVDLQ RSNENLQQFA YVASHDLQEP LRKIQQFGDL LKSQYAQTSG EALVYLERMQ SAAARMSVLI KALLNFSQIA NQQDTRIPVS LAQVVRDVLS DIDLLRTETQ ARIEVAPLPV VEGDARQLGQ LFQNLLGNAL KFRRRDTPPV IQVKSERVIR HELPAGVKPA RQVEAYYQIE VIDNGIGFEE QYVDRIFQIF QRLHGKSAYA GTGIGLAICE KVVANHGGAI TATSQPGQGA TFTIYLPA
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