Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2194 |
Symbol | |
ID | 8725932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2660187 |
End bp | 2660744 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387015 |
Protein GI | 284037085 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.73675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00108321 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCGATA TTATTGAGCG GCTACGAGCT GGCGAACTCC TGCGAAAGGA TGACCCGGAG TATTACAAAT TTGGCGAGGT CGTTTCCCGC GCCATTCGGC TGTGCGTGAC CATGAACGCC ACGGCAACGA GCGTCGATCA GGTCCGTAGT CAGTTAAGCA CGATTATCGG CTCCGACATC GACGAGTCGA CGGCTATTTT TCCGCCGTTT CACACCAATT TCGGCCAGTT TATCAGCCTC GGCCAAAACG TCTTCATCAA TCACGCCTGC TCCTTTCTGG ACATTGGTGG CATCACCATT GAGGATGATG TGCAGATTGG ACCCCACGTT AACCTCACCT CCGAAAATCA CCCGCTTGAT CCAGCCGACC GAAAAACGCT GATTCCCAGA CCTATCCTAA TCAAACGAAA TGCCTGGATT GGGGCCGGAG CCACCATTTT ACCCGGCGTT ACGGTGGGCG AAAACGCCAT CGTTGCCGCC GGTGCGGTCG TAAGTCAGGA TGTACCGCCC AACACAGTGG TGGCTGGCAT ACCGGCAAAG GTTGTGAAGA CACTATGA
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Protein sequence | MPDIIERLRA GELLRKDDPE YYKFGEVVSR AIRLCVTMNA TATSVDQVRS QLSTIIGSDI DESTAIFPPF HTNFGQFISL GQNVFINHAC SFLDIGGITI EDDVQIGPHV NLTSENHPLD PADRKTLIPR PILIKRNAWI GAGATILPGV TVGENAIVAA GAVVSQDVPP NTVVAGIPAK VVKTL
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