Gene Slin_2194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2194 
Symbol 
ID8725932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2660187 
End bp2660744 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387015 
Protein GI284037085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.73675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00108321 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCGATA TTATTGAGCG GCTACGAGCT GGCGAACTCC TGCGAAAGGA TGACCCGGAG 
TATTACAAAT TTGGCGAGGT CGTTTCCCGC GCCATTCGGC TGTGCGTGAC CATGAACGCC
ACGGCAACGA GCGTCGATCA GGTCCGTAGT CAGTTAAGCA CGATTATCGG CTCCGACATC
GACGAGTCGA CGGCTATTTT TCCGCCGTTT CACACCAATT TCGGCCAGTT TATCAGCCTC
GGCCAAAACG TCTTCATCAA TCACGCCTGC TCCTTTCTGG ACATTGGTGG CATCACCATT
GAGGATGATG TGCAGATTGG ACCCCACGTT AACCTCACCT CCGAAAATCA CCCGCTTGAT
CCAGCCGACC GAAAAACGCT GATTCCCAGA CCTATCCTAA TCAAACGAAA TGCCTGGATT
GGGGCCGGAG CCACCATTTT ACCCGGCGTT ACGGTGGGCG AAAACGCCAT CGTTGCCGCC
GGTGCGGTCG TAAGTCAGGA TGTACCGCCC AACACAGTGG TGGCTGGCAT ACCGGCAAAG
GTTGTGAAGA CACTATGA
 
Protein sequence
MPDIIERLRA GELLRKDDPE YYKFGEVVSR AIRLCVTMNA TATSVDQVRS QLSTIIGSDI 
DESTAIFPPF HTNFGQFISL GQNVFINHAC SFLDIGGITI EDDVQIGPHV NLTSENHPLD
PADRKTLIPR PILIKRNAWI GAGATILPGV TVGENAIVAA GAVVSQDVPP NTVVAGIPAK
VVKTL