Gene Slin_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2177 
Symbol 
ID8725915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2639854 
End bp2641485 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content42% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003387001 
Protein GI284037071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.816506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTG CGTCTTTTTT AAGTCTACTT TTAGTTTTCG AGGTCGCCCA CGCTCAAACG 
CTACCATCCA TACCCTTAAA GATGGATTCC CTATTTAAGG GCTACAATCA ATCTGCTGGA
CCCGGTTGCG CCGTGGCAAT TATACAAAAC GGCCAAGTTA TCTTTAGTAA GGGGTATGGA
ATGGGCAATC TGGAGTATAC TATTCCCGTC ACGTCGAAAA CCGTATTTGA TGTGGCTTCC
TTAGCGAAGC AGTTTACCGG GTTTGCCATT TCTACCTTAG TGCAGGAAGG GAAGATAACG
TTAAGTGATG ACATTAGAAA ATACTTACCC GAATTGCCAA GATTCGCTCA GACCATTACG
ATCGGTCATT TAGTGCACCA TACGAGCGGA ATTAGAGATT GGCCGGAAGC CTTGATGGCC
GCAGGCTGGC GATACAGCGA ACTGTGTTCC TTTCAGGATA TTATGCATAT GGTCAAAAAT
CAGCGGGAAC TAGATTTTGT ACCAGGAACA GAAGAGTCAT ATTCTAATTC AGGCTATAAT
ATTTTAGCCG CCTTGGTGGA AAAGGTGAGT GGTCAGACTT TCCCAGCATG GACCAGCGAA
CACATTTTTA AACCGCTGCA AATGACCAGT ACTCTTTTTT TGGATGACAA TGGGCGAGTA
ATTCCAAACC TAGCTTATTC CTATTACAGT AATCAGGATA TATTCTTAAA GAGTACCGAT
GTACTGACGG CTTACGGATC GAGCTCGTTG TATACAAGTT TAGAGGATAT GGCTAAGTGG
GTCATTCATT TTCAACAGGC TTTAGAAACT AAGGACCCAG TTTTTATCCG CATGTTGGAT
ACCGGTAAGC TTAATAATGG AGAAAAGGTA AGTTATGGAT TTGGCCTGGA AACAGGGACG
TATAATGGGT ATTCAACTAT TGTGCATACG GGTGCTTGGG CTGGTTATCG GACCATTATT
AGGAATTTCC CGGATGAGAA ACTCTCCGTC ATTATCCTAA GCAATGGTGA TGATAATAGC
ATCAATAATC AGTACATGGC AAAAGTGGTT AGTCTGTTTC TAACCGACAA AACGAAGCCA
TCCACCCCTG TACCAACGAT TACCAGTGTA AAAGTTAATC CGGAACGATT GAAAAAATAT
GTAGGTCTGT ATAAGTGGCG GCCAGGAGAG GTACATATTA GTTTAGAAAA AGACACCATA
AGATTCCAGT TCATCGGAGA AGATAGCTAT CCAACCATTG CCCTCAATGA TAGTACGTTT
ATGTTGACTG TAGCAGGTTT GCCAATAGTT TTTCATCAGA GTAAAGGCGG GGCTGTCAAT
TCATTCACGT TCAAGGACCG TTTAGGGAAA AAATTCACCC CTCACTCGGC TTCAGCAGAC
GAGTTGAAGA CCTATGTAGG AACCTACTTT AGTCAAGAAT TACAGGCGGA ATACACGGTT
GGTATCCAAG CTAATAAATT AGTCGTTCGC CATTTTCGTC GAGGTGATTT CCCCATGTCT
TCCAATATGA AAGATGAATT TACGGGCGAT TTAGGAGTTG TACGTTTTAT AAGAAACAAC
AGGCAACAGG TACGAGGATT TAACTTATCA GGCGAACGTG TCAGGAACAT ATATTTTGAC
AAAAAGCACT AA
 
Protein sequence
MRIASFLSLL LVFEVAHAQT LPSIPLKMDS LFKGYNQSAG PGCAVAIIQN GQVIFSKGYG 
MGNLEYTIPV TSKTVFDVAS LAKQFTGFAI STLVQEGKIT LSDDIRKYLP ELPRFAQTIT
IGHLVHHTSG IRDWPEALMA AGWRYSELCS FQDIMHMVKN QRELDFVPGT EESYSNSGYN
ILAALVEKVS GQTFPAWTSE HIFKPLQMTS TLFLDDNGRV IPNLAYSYYS NQDIFLKSTD
VLTAYGSSSL YTSLEDMAKW VIHFQQALET KDPVFIRMLD TGKLNNGEKV SYGFGLETGT
YNGYSTIVHT GAWAGYRTII RNFPDEKLSV IILSNGDDNS INNQYMAKVV SLFLTDKTKP
STPVPTITSV KVNPERLKKY VGLYKWRPGE VHISLEKDTI RFQFIGEDSY PTIALNDSTF
MLTVAGLPIV FHQSKGGAVN SFTFKDRLGK KFTPHSASAD ELKTYVGTYF SQELQAEYTV
GIQANKLVVR HFRRGDFPMS SNMKDEFTGD LGVVRFIRNN RQQVRGFNLS GERVRNIYFD
KKH