| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2174 |
|---|
| Symbol | |
|---|
| ID | 8725912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2635157 |
|---|
| End bp | 2636398 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003386998 |
|---|
| Protein GI | 284037068 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.534906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGT ATACCGATAG TGAGCTGAAG CAAGATGTCG AGCGCGTTAA CCAGATTGCG
ATCGTCCCCA TCTTGCTCGA TGTGATTTGT CAAACAACCG GTATGGGCTT TGCCGCCGTA
GCCCGAGTCA CCTCCAGCCG CTGGATTACC TGCAGCGTGC GAGACGACAT TCAGTTTGGC
CTAGTCCCGG GGGCTGAGTT GAAGCTGGAA ACCACCATCT GTAATGAGAT CCAGGGTTCC
CATCAGCCGG TGGTGATCGA TCATGTCGAT CAGAGTGAAC TCTATTGGAA CCATCATACC
CCAGCTCAAT ATGGCTTTCA GAGCTACATC TCCTTTCCCA TCTTTTTGAA AACAGGCGAG
CTTTTCGGTA CCCTTTGCGC CATTGATCCC AAACCCGCCC GGCTCGACAA CCCCAGGATT
AAAGGCCTCT TCACCGCTTT TGCTGACCTG ATCTCGTTTC ATCTGCAGCA GACGGACTTA
CTGGAACAAA GCGATCAGGC GGTCACCAAT TTGAGTCGAC AGCTCACCCA AAGCGAGGAT
GAGAACCGAC AGTATCGCCA CATAGCCAAT CATAACTTAC AAGAACCTCT GCGCAAGCTG
CGGCTGTTCA GTACGATGTT GGTGGATGTT ATTCGAAGAA ACGAGATGGA TCAGGCGGAA
GCTACTGCCC TGAAAATAAA TGGGGCCGCC GAGAAGTTCG CCAGGATGAT CAAGGACTTA
GCCAACTTTT CAGTCTTAGA TCAAACCGAT GGGGCTCTTC AAGAGACGAA TCTCCATGAG
GTCTTATCGG TCGTAGCGAC CCAATTAGCG CCTAAGTTGC GGGCTAAAAA GGCGAGTCTC
CAAGTAGGTG AGCTGCCCAT CATTCAAGCC ATTCCCATCC AGATAGAGCA ACTGTTCTAT
CACCTGTTAG ACAATTCCAT TAAGTTCGCC AGGCAACAAG AGCTTCTAGT TATCTCTGTC
ACCAGCCAGG TGGTAGCTGG TTCATGGTTG GGCAAGTCCT TATCTCAGGG CTCAGCGTAT
GTGCACATTC AAGTGGTCGA TAATGGCATC GGGATGCCGC AATCCCAGCT GGAAAAGCTC
TTTGATATGT TCGCCAAGTT GCCCGCCGAC ACGGCTGGCC ATGGCGAAGG GTTTGGCTTA
ACCTACAGCC GCAAGGTGGT GCATAATCAT GGTGGTCAAA TTAAGATCGA ATCGGAAGTC
AATCGAGGCA CAACGGTATC GATTCTTCTC CCCGTTTACT GA
|
|---|
| Protein sequence | MNKYTDSELK QDVERVNQIA IVPILLDVIC QTTGMGFAAV ARVTSSRWIT CSVRDDIQFG
LVPGAELKLE TTICNEIQGS HQPVVIDHVD QSELYWNHHT PAQYGFQSYI SFPIFLKTGE
LFGTLCAIDP KPARLDNPRI KGLFTAFADL ISFHLQQTDL LEQSDQAVTN LSRQLTQSED
ENRQYRHIAN HNLQEPLRKL RLFSTMLVDV IRRNEMDQAE ATALKINGAA EKFARMIKDL
ANFSVLDQTD GALQETNLHE VLSVVATQLA PKLRAKKASL QVGELPIIQA IPIQIEQLFY
HLLDNSIKFA RQQELLVISV TSQVVAGSWL GKSLSQGSAY VHIQVVDNGI GMPQSQLEKL
FDMFAKLPAD TAGHGEGFGL TYSRKVVHNH GGQIKIESEV NRGTTVSILL PVY
|
|---|
| |