Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2168 |
Symbol | |
ID | 8725906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2629788 |
End bp | 2632274 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003386993 |
Protein GI | 284037063 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.419482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG AAAATCCTTC CCCGCTTGAT TCAACGGAGA CTAGTTCATC GAACGAGTAT CAGCAACGCC TGTTGACCGC CTTCGCCCAA GCGTTTTGGG AAACCGATGC CCAGGGGATG GCCACGGCCG ACTCACCCAG TTGGCGGGCG TTTACGGGCC AAACCCTCCA GCAATGGCTG GGGGAAGGTT GGCTAAAGGC AGTTCACCCG GAAGACCACG CCTACGCCCT GGAACAATGG CAGGAGGCGC TGCGTAGCCA ACACCCGATG AACGCCGAGT TTCGCTTGCA AACGCCCCAG GCAACCTGGT GCTGGACCAA CGTGCGGGCT AGTCCTATAC TCAACGCCGA GGGATCAATC CAGGGCTGGA TGGGCATTGT TCTTGATATT ACGCCGCAAA AGCAGGCTGA GTTGGCTTTA CGCAAGAGTG AAGAACAGTT CCGTCTGTTA GTGACGGCCA GTTCGGATAT CGTCTACAAA ATGAGTCCCG ACTGGTCCCG GATGGAGCAA CTCATGGGCA AGTCGTTTCT GGCCGATACC ACCCAGCCCA GTGCCACCTG GCTTCAGACC TATATCCCGG CCGAAGACCA ACCGTCGGTG CAGGCCGTGA TTCAGCAAGC CATTCGTACC AAAAGTATAT TCGAACTTGA ACACCGGGTA CGCAAAGCCG ATGGAACAGT AGGCTGGACG TTTTCAAGGG CCATTCCCCG GTTGGACGAG CAGGGCCGCA TTCAGGAGTG GCTGGGTGTG GCCAGTGATA TTACCCAGCG TCGACAGGCG GAGGAAGCCT TGCGTCAAAG CGAAGCCCGC CTGCGGGCCG TGCTGGAAAG CATCGTTGAT GGGGTCTACA TCGGTACCCT GGAGGGCATA ACCCTGATCA ATCAAACCGC CCTGGAGCAG TTGGGGTATG CCACCCCCGA TGAGTTGAAT CGGCATGTGG GCACTCTGGC CGGTGAGATT CAGACCCGCG ACTGGCAGAC GGGGGTGCTC ATTCCCCTCG AGCAGCAGGC ATTTGCCCGG GCCTTAAGGG GCGAACGGGT GGTGCAGGAT GTGCTGGTGC GGCATCGACT GAGTGGGCAA GATCGGGTAG TGCGGTGTGC GGCCGGGCCG GTGCTGGTTG ATGAGCAGGT AGTGGCTGCG GTGGCCATCA ATGCGGATGT CACGGATATC GTCAGAGTTC ACCGACAGGT GGAAGAAAGT GAAAGGCGGC TTCAGCAGGC CATCGAGCTG GCCGAGCTGG GCACCTACAC CATTGAAGTG GCCACCGATC GCATCACCAA ATCAGCGCGG GTGGCCGACT GGTACGGCCT GCCTGAGCGG ACCACGGTGG CGAGCTCGTT TGGGTCGATC CAGGCGAGGG ATCGCCAGCG GGTGAATCAG GTGTTGACCG ACGCCCTTCG GCCCGAATCA TCGAGTTTTT ATCAGGTCGA GTACACGATC ATTCACCCCC GGACGGGCCA GCAGCGCATC CTGCGTACCA ATGGACAGGT GCACCGGGAT GCCTCGGGGC AACCCCTCCG CGTTGAGGGC ATTGTGGTGG ACATCACCAC CCAGCGTCAG TCACAGCTGG CCCTTGAGCA ACAAGTGGCC CAACGGACCC AGGAGCTGGC GGCAGCCATG CAGCAGTTAG AGGCCACCAA TGAGGCGTTG GTGGTGACGA GTGGACAATA TGCCCTGTTG AACCAGGAAC TGAGAGCATC CACCGCCGAA GTCGGCAAGG CCAACAACGA CCTGGAAGAA GCCAATCGCC AGTTGAGCCG CTCCAATCAG AACCTGGAAC AGTTTGCTTA CATTGCCTCT CACGATTTGC AGGAGCCTCT GCGCAAGATT CAACAGTTCG GCGATTTACT CAAGAGCCAT GTGCCCCCCT CCAGCGAGGA AAACGCTTAC CTGGAGCGCA TGCAGGCAGC GGCCAGCCGC ATGTCGCGGT TGATTAAAGA TCTGCTGGCG TTTTCCCGCA TCGCCATGGG TCAGGTCTTA GCGGAACCGG TATCCCTGGC GGACGTACTC CGGAGGGTAC AGGATACCTT GTCGCTGGCT ATCGAGGAGA GCTCCGCCCA AATTCAACTC GACGACTTAC CGACCCTACC AGGCAATGCC ACTCAATTAG AGCAACTCTT TCAGAATCTA CTCTCGAACG CCATCAAGTT CAGCCGAACC AACCAGGCGG GGGAGCCGAT TATCCCTCAG ATTCGGATCA CCAGCCAAAT GATGAACGCC AACGAGTTAG GGGTGACTGT CAAACCGAGC CGAGCCGCCA CCAGCTACTA TCAAATCGAG GTAGCGGATA ATGGGATTGG TTTTGATGAG AAGTATACCC CACGGATTTT TCAGGTGTTC CAGCGGCTGC ATGGCAGGAA CGAGTTTGCC GGTACGGGGG TGGGACTCGC GATTGTTCAG AAAGTGGTGG ACAATCACGG TGGGGCCATT AGCGTTTCGA GCCAACCGGG GCAGGGTGCC CGATTCAGGG TGTATTTACC GGCCTAA
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Protein sequence | MSAENPSPLD STETSSSNEY QQRLLTAFAQ AFWETDAQGM ATADSPSWRA FTGQTLQQWL GEGWLKAVHP EDHAYALEQW QEALRSQHPM NAEFRLQTPQ ATWCWTNVRA SPILNAEGSI QGWMGIVLDI TPQKQAELAL RKSEEQFRLL VTASSDIVYK MSPDWSRMEQ LMGKSFLADT TQPSATWLQT YIPAEDQPSV QAVIQQAIRT KSIFELEHRV RKADGTVGWT FSRAIPRLDE QGRIQEWLGV ASDITQRRQA EEALRQSEAR LRAVLESIVD GVYIGTLEGI TLINQTALEQ LGYATPDELN RHVGTLAGEI QTRDWQTGVL IPLEQQAFAR ALRGERVVQD VLVRHRLSGQ DRVVRCAAGP VLVDEQVVAA VAINADVTDI VRVHRQVEES ERRLQQAIEL AELGTYTIEV ATDRITKSAR VADWYGLPER TTVASSFGSI QARDRQRVNQ VLTDALRPES SSFYQVEYTI IHPRTGQQRI LRTNGQVHRD ASGQPLRVEG IVVDITTQRQ SQLALEQQVA QRTQELAAAM QQLEATNEAL VVTSGQYALL NQELRASTAE VGKANNDLEE ANRQLSRSNQ NLEQFAYIAS HDLQEPLRKI QQFGDLLKSH VPPSSEENAY LERMQAAASR MSRLIKDLLA FSRIAMGQVL AEPVSLADVL RRVQDTLSLA IEESSAQIQL DDLPTLPGNA TQLEQLFQNL LSNAIKFSRT NQAGEPIIPQ IRITSQMMNA NELGVTVKPS RAATSYYQIE VADNGIGFDE KYTPRIFQVF QRLHGRNEFA GTGVGLAIVQ KVVDNHGGAI SVSSQPGQGA RFRVYLPA
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