| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2158 |
|---|
| Symbol | |
|---|
| ID | 8725896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2617547 |
|---|
| End bp | 2618227 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | lipolytic protein G-D-S-L family |
|---|
| Protein accession | YP_003386985 |
|---|
| Protein GI | 284037055 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAGA GACTACTACT ACTTTTAGTT ACCTTTTTAT CAAGCTGTAA GCCAGCGACA
ATATATACAA CCCTATGTGA AGAGAAGAAT CCGTCAAATT CAGCGACTGT CATAATTGGT
TCGTATGCAG CAGCAGGTTG GGGAGCTTCG GATTACAAAC ATTCATGGGC GGGGCTACTC
ACCCAAAAGT TATCAACTAG CCGCGTTGTT AACCTGGCTA GAGGTGGCTA CACTAGTTAT
CAGCTTCTGC CAATAGACAC CAGTCACCCG ACTAACCGAC CAAGTCCAGA CACTTTGCGT
AACATAAACG CAGCTCTTAA AGAGAAACCT ACCACCTTAA TTCTTAGTAT GTCGTCAAAT
GATCTGGTTG CTGGCTATAG TGTTGAGGAG ATTATCGCCA ATTTCAATAC GATCAGGAGC
AAAGCTTTGG CCGCTGGGGT AGCCAATATA ATTGTTATAA CACCTTTACC GCGTAACTTC
AGTACTGAAG TTACGGCCAA ATTGTTACTC CAGCGAGATT TAGTTTTGAA GAACTATGGC
TCATCGGCAG TCAATATTTT TGACCCACTT GCAAACGAGC AGAATTTAAC AAAGCCAGAA
CTTCTTAGTG AGGATGGTTT TAATCCGAAT GATAAAGGAC ATGCCATAAT TTTCAAGGTG
ATTGAAGGTT TCCTTCTTTA A
|
|---|
| Protein sequence | MPERLLLLLV TFLSSCKPAT IYTTLCEEKN PSNSATVIIG SYAAAGWGAS DYKHSWAGLL
TQKLSTSRVV NLARGGYTSY QLLPIDTSHP TNRPSPDTLR NINAALKEKP TTLILSMSSN
DLVAGYSVEE IIANFNTIRS KALAAGVANI IVITPLPRNF STEVTAKLLL QRDLVLKNYG
SSAVNIFDPL ANEQNLTKPE LLSEDGFNPN DKGHAIIFKV IEGFLL
|
|---|
| |