Gene Slin_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2142 
Symbol 
ID8725880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2598674 
End bp2599141 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content53% 
IMG OID 
ProductRES domain protein 
Protein accessionYP_003386969 
Protein GI284037039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACGG CCTACCGCAT CATCCGGGAT AAGTATCGCC ATGAACCCTT ATCCATCGAA 
GGCAGCCGGC TGTTTGGCGG CCGTTGGAAT CCTAAAGGAA TCGGCGTTTT ATACGCCACC
TCAACGCCGG AATTAGGCTT GGTAGAAACC TTAGCTCATG CGCCGGGCGT GCGCTACGAG
GAGTTACCCA CCTATTGGGT GTTCACCCTG GAGATCCCGG AAGATATTCG CTATTACCAA
CGGCAGGAGC TACCTGCCTA TTGGCAGGAT GAGACGTACG AGCGCACCCA AGTTTGGTTA
CAGGACTGGT TAGACTTACC CGATCAGTTA GGTGTTGCCA TTCCTTCGGT CTTAGTGCCG
CTGTCCTACA ACATCATTCT GCATCCCAAG CATCCAAGCT TTTCTCAGAT TAAGGTAATC
GGTCAGGAGA TTCAGCCCGT TGACCGTCGC TTATGGCGGC AGGGCTAA
 
Protein sequence
MYTAYRIIRD KYRHEPLSIE GSRLFGGRWN PKGIGVLYAT STPELGLVET LAHAPGVRYE 
ELPTYWVFTL EIPEDIRYYQ RQELPAYWQD ETYERTQVWL QDWLDLPDQL GVAIPSVLVP
LSYNIILHPK HPSFSQIKVI GQEIQPVDRR LWRQG