Gene Slin_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2129 
Symbol 
ID8725867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2581952 
End bp2583169 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content39% 
IMG OID 
Productpeptidase C10 streptopain 
Protein accessionYP_003386959 
Protein GI284037029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0701218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTAA ATTATTTTAC ACTTACACGT CTGTTGTCAT TCTTAATTAT ATTCGGAGTG 
GCATCTTGTC AGAAATCGGG CTTATTAGAG CCTTCAGACC CTCAGATAAA TTCGAATATA
GTTTCGATTG AACAAGCTAA TAAAGTTGCT AGCACAGCTC CACAAATAGT TAATCCTAAA
AACGCGAATA GTCAAGCACG GATTGGATCA TCTAAAAAAA CCCAAGAAAC GTTCACCAAA
TATGATGAAT ATAAGAATCC ACTACTTTAC ATTATTACCT ATAAAGAAGG AGGGTTTATC
ATAGTTTCTG GAGACAACCG TATCACACCG GTTTTAGCTT ATTCCGATAA TAATTCTTTT
ATCAACAAAA CCGACAATAT GCCTTCAGGG CTCAAAGATT GGTTTTCTAG TGTTGAACAA
GTCATTAAGA GAATTCGTAA GGATAATCAG GAGCAAGATA AAACCGTTAA ACGAGTATGG
GATAAATTTA TACAACAATC TGCTAATGGT CGGCTAATAA CAGTGGAAGG CGATTGTAAT
ACCGATCCTT CCATGAAAGT GTATTTTGAG TTTGGCCCAT TTGTGACTAC CACATGGGAT
CAAGCTGATG GATATAATGA TGCACTCAGT TATTCGAGTT GCACGACAAC TGCTAATGGG
AAAGTATTAA CTGGTTGTGT AGCAACTGCA GTAGCCCAAA TTATGAAGTA CCACGCATAT
CCTACAAGTT ATAGCTGGTC AAGCATGCCT AATAATTATG GAACTAACGC CACTGCAGTC
TTAATGCGCG ATTTGGGTAC CTCAGCCAAT CTAAATGCAA GTTATGGATG TAACAGTACT
TCTGCCCCCA TGTCCAATAT CCCGACGACT TTTAGTCACT TTGGCTATTC TACACCCTCA
CTTTCAAGTT ATAATTATTT TACAGTAAAG TATGAACTCC AAAATTATAG TAGACCTGTC
ATTCTTAAAG GTCAGAGTAA TTCAGATGCC CATGCTTGGG TCTGTGATGG TGTAAGGCAC
TGGGACTATT ATTCTTGCCA GCCAGACCCA AATACACCCG GGGAAAAGAT CGCAGTATAT
ACAGGCTACG ATGCTGGCCT ACATATGAAT TGGGGGTGGG GTAATAGTTA TAATGGCTGG
TATAGTGCTA ACAACTTCAA TCCAAGTGGC TACGCTTTCA ATTCATATAG AGAAATGGTA
ACGGGAATAA CTCATTAA
 
Protein sequence
MNVNYFTLTR LLSFLIIFGV ASCQKSGLLE PSDPQINSNI VSIEQANKVA STAPQIVNPK 
NANSQARIGS SKKTQETFTK YDEYKNPLLY IITYKEGGFI IVSGDNRITP VLAYSDNNSF
INKTDNMPSG LKDWFSSVEQ VIKRIRKDNQ EQDKTVKRVW DKFIQQSANG RLITVEGDCN
TDPSMKVYFE FGPFVTTTWD QADGYNDALS YSSCTTTANG KVLTGCVATA VAQIMKYHAY
PTSYSWSSMP NNYGTNATAV LMRDLGTSAN LNASYGCNST SAPMSNIPTT FSHFGYSTPS
LSSYNYFTVK YELQNYSRPV ILKGQSNSDA HAWVCDGVRH WDYYSCQPDP NTPGEKIAVY
TGYDAGLHMN WGWGNSYNGW YSANNFNPSG YAFNSYREMV TGITH