Gene Slin_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2118 
Symbol 
ID8725856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2560874 
End bp2561404 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content53% 
IMG OID 
ProductRES domain protein 
Protein accessionYP_003386951 
Protein GI284037021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0310732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTGGG CCGCATCGAG CACGGTATTG TCGGCTAATT ACCCTGCTCT CTGGATGTTA 
ACTGTTTACC GAACCGTCAA AGCAAAGTAC ATCGACGAAC CCTTAGCCAC CGAAGGCGCG
CGGCTGTTTG GGGGCCGGTG GAACCCGAAA GGCTACCCCT TGCTTTATAC TACCTCCTCC
CCGGCCTTAG CCTTGGTCGA ATCGTTGGTA CACCAACCTC GAGTCCAGTA CGACAAGTTA
CCCAAGCTCT TTCTATTTAC CCTAGAGGTG CCTGATGACT CGTTAACCAC TTGGTCGCTG
GAGGACTTGC CGACTTACTG GAACGAAGAG AGTTATGAAC GAACCCAGTG GCTGTTGAGG
AATTGGCTGG ATGAGCCCAG CACGCTAGTG GCGGCAGTGC CCTCGGTGGT AGTGCCGATG
TCTTACAACT ATTTGCTTCA TCCTTCTCAT CGGGCTTTTA ACCAGATACG GGTTATCGAA
CAAGCGCCTT TTCCGATTGA ACGTCGGCTC TGGCAGTCGG ATACTCCTTG A
 
Protein sequence
MCWAASSTVL SANYPALWML TVYRTVKAKY IDEPLATEGA RLFGGRWNPK GYPLLYTTSS 
PALALVESLV HQPRVQYDKL PKLFLFTLEV PDDSLTTWSL EDLPTYWNEE SYERTQWLLR
NWLDEPSTLV AAVPSVVVPM SYNYLLHPSH RAFNQIRVIE QAPFPIERRL WQSDTP