| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2104 |
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| Symbol | |
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| ID | 8725842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2540287 |
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| End bp | 2542032 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003386938 |
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| Protein GI | 284037008 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.475472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT ACCTACCTGT CCTGATCGCC ACGAGCCTGT CCCTTACGGG CTGCGCTGAT
CTGCTGAAAC CTGAGGTTGA AAATCTTCCG GGCAAGGAGG CCATGTATAA AGAGGTGACA
TTTGCCCAGG GGTTCCTGCT CAATGGGTAT ACCCGCCTGC CTGGCCTGTC ATTCAACGAT
GTGGCCACCG ACGATGCCGT CAGCAACGAT AAAAACAACG CTTTCCAGAA AGTCGCCACC
GGCCAGTGGA CGGCCAACTT TAACCCCGCC GACCAGTGGG TCAACAGTAT GGCGGCCATT
CAATACCTGA ATACCATGCT GGCGGAGGTC GATAAAGTAA CCTGGGCCAT CGACCCCAAA
GCCGCCCAGA TGTTCAGGGA CCGGATCAAG GGCGAAGCCT ACGGCCTGCG TGCGTTCTAC
ATGTTTCAAC TGCTGCGGGC CCACGGCGGC TGGTCGGGCG GGGGCGAGTT GCTGGGCGTT
CCGATCCTGA CCAAACCACA GGATACGAAC TCCGACTTCA ACCAGCCCCG CGCCACCTTC
GAAGCCTGTA TGCAGCAGTT CTACAGCGAC ATAAAGCAAG CCGAAACCCT ACTGCCACTC
GATTACGAAG ACGTATCAAC CGCTGGTCAG GTGCCATCTC AATATGCGGG TATCAGCCCG
GAAGAATACA CCCGGGTGTT CGGGCAGTAT TCCCGGCTCC GGCTGACGGC CCGCATTGCG
AAAGCCATCC GAGCCCAGGC AGCCCTTCTG GCGGCAAGTC CGGCTTACAA GACCGGCACG
ACCACCACAT GGGCCGATGC CGCCAATTAT GCCGGTGAAG TCCTGAAACT CATTGGCGGG
CCTGACCGAC TGGCGGCCAA TGGCGGAACC TGGTACGACA ACCGTACCGA GATCAACAGC
CTCGGCGCGG GTATCAACCC GCCGGAGATT CTGTGGCGGG GCGACGCGTC GAACAGCCGG
AATCTGGAAG AAGACAACTA CCCACCGTCG CTCTTCGGCC GGGGGCGGAT CAACCCCACG
CAGAACCTGG TCGATGCATT TCCAATGGCC AACGGATACC CCATTTCGGC ATCGGCGAGT
GAGTACAGAG CCCAGGCACC CTACACCAAC CGCGACCCTC GTCTGCAACG CTATGTAGTG
ACCAACGGCA GCACAATGGG GCCATCCAAC ACCGTTATCC GGACCGAAAC GGGCGCTGGT
AACGATGCCG TCAATCAGAT CGAAACATCG ACGCGTACGG GCTATTACCT GCGAAAACTG
CTCCGGGCTG ACGTAAACCT AAACCCCATT GGGGCCAATG AGCAGCGGCA TTACACGGCC
CGCATCCGGT ATACCGAGAT CTTCCTGATC TACGCCGAAG CGGCCAACGA GGCCTGGGGT
CCCGACGGAC AGGGGACGTT TGGTTTCTCG GCACGCGATG TGATCCGGGC GATCCGCAAA
CGGGCCGGCA TCGGTACAAC CAACAACGAC GCCTACCTGA CCTCGGTGCA GAGCCAGGCC
GACATGCGTC AGCTGATCCG GAATGAACGT CGGCTGGAGC TGTGCTTCGA AGGATTCCGG
TTCTGGGATC TGCGTCGCTG GAGCGAAAAA CTAACCGAAA CGGCCAACGG CATCCAGATC
ACGAACGGAA ACTATGCCGT TATCCCGGTC GAAAACAGAG CGTTTGCGGC CTACATGAAC
CACGGCCCGA TCCCATATGG CGAAATGCTC AAATGGAAGG CACTCGTTCA AAACAAAGGC
TGGTAA
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| Protein sequence | MKKYLPVLIA TSLSLTGCAD LLKPEVENLP GKEAMYKEVT FAQGFLLNGY TRLPGLSFND
VATDDAVSND KNNAFQKVAT GQWTANFNPA DQWVNSMAAI QYLNTMLAEV DKVTWAIDPK
AAQMFRDRIK GEAYGLRAFY MFQLLRAHGG WSGGGELLGV PILTKPQDTN SDFNQPRATF
EACMQQFYSD IKQAETLLPL DYEDVSTAGQ VPSQYAGISP EEYTRVFGQY SRLRLTARIA
KAIRAQAALL AASPAYKTGT TTTWADAANY AGEVLKLIGG PDRLAANGGT WYDNRTEINS
LGAGINPPEI LWRGDASNSR NLEEDNYPPS LFGRGRINPT QNLVDAFPMA NGYPISASAS
EYRAQAPYTN RDPRLQRYVV TNGSTMGPSN TVIRTETGAG NDAVNQIETS TRTGYYLRKL
LRADVNLNPI GANEQRHYTA RIRYTEIFLI YAEAANEAWG PDGQGTFGFS ARDVIRAIRK
RAGIGTTNND AYLTSVQSQA DMRQLIRNER RLELCFEGFR FWDLRRWSEK LTETANGIQI
TNGNYAVIPV ENRAFAAYMN HGPIPYGEML KWKALVQNKG W
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