| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2101 |
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| Symbol | |
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| ID | 8725839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 2532200 |
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| End bp | 2535316 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003386935 |
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| Protein GI | 284037005 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.693236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.298537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTA CCCGATTTGT CGGATTTTGG ATTGTGTGGA CATGCTTTTT ATTAAGCAGT
CAACCAGTTT TAGCGCAGGA AAGCCATACC GTAAAAGGAT TGGTACTCGA CGAAAACCAG
AAACCGCTAT TTGGTGCCTA TGTGATCCTG AAGAACACAA CAACCGGCAC GACAACGGAT
GTCAATGGAG AATTTGCCCT GAAAGTACCC GCCGGTAAGC AAACGCTGGC CATCTCTTAT
CTTGGGTCGA AGCCACAGGA CATTACGGTG GAAAAGGGGG GGAATGTTAA GGTTGTACTC
TCGGGCGGTG ATATTACCCT GGGCGAGACA GTCGTGGTGG GCTATGCGCA GCAAAAAAAG
CAAAGCGTTG TGGGAGCCAT CTCACAAACC ACCGGGAAAG TACTCGAACG AGCCGGTGGC
GTATATAGTG TAGGGTCAGC ACTGACCGGT AATGTGCCGG GGGTGATTAC TACCTCCAGC
ACAGGCATGC CCGGCGAAGA AGATCCCCGC ATTCTGATTC GGGGGTTAAG CTCCTGGAAC
AACAGCTCTC CGCTCATTCT GGTCGATGGG ATCGAACGCC CCATGAACAG CGTTGACATT
TCCTCGATCG AAACGATTTC TGTACTGAAA GATGCGTCCG CAACGGCTGT ATTTGGCGTG
AAGGGTGCCA ACGGCGTTAT TCTGATCACC ACTAAACGGG GTAAGGAAGG TAAAGCGAAC
ATCAGCATAC GGGCCGACTA CACCCTAAAG GCACCCTCTA CCCTACCCAA CAAGTATGAC
GCCTACGATG CCCGACGCAT CCGTAACCAG GTCATCGAAA ACGAATTAGG GCTGGAGTCG
GCAGGCTGGG CAACCTACAC GCCCTACGAT ATTCTAACGA AATACCGCAA CCCGGCCAAC
CTGGCCGAAG CCGAGCGCTA CCCGAACGTA AATTGGGCCA AAGAGATGTT CAAGCCGGTT
ACCCAAACGT ATAGCGCCAA CCTCAACGTA TCGGGAGGAA CGTCGTTCGT CAAGTATTTC
GCATCGGCCG ACTTTCTGAT GGATGGCGAC ATTTTTAAAG AGTGGGATAA CAACCGGGGG
TATCAGGCGG GCTACGGATT CAACCGGATC AACGTACGGA CAAACCTTGA TTTTCAGCTG
ACACCCACGA CGTTGCTGGT CACCAACCTG TCCAGCTCAA ACGGGGTCAA AAAGAGTCCC
TGGGGGGCTA CCGGTGGCGA ATACGATATG TGGCAAGGTG CCTATGGCGT AGCGCCTGAT
GCCATGCTGC CCCGCTATTC CGACGGTACC TGGGGCTATT ATGCGCAGGA CCCCGTGGCG
GCTACCAACT CCATTCTGAA TCTGGCCCGC AGTGGTATCA TGAAGCGAAC CACGAGCCGG
ATCACCACGG ATTTTACGCT GAATCAGGAT TTGAAATCAA TTGCGAAAGG CCTAAGTACA
TCGGGCACCA TTTCGTGGGA TAATAGCTTT GTGGAGAGCC AACGCGGCAT CAACGACCTC
TACAATGATC CGCAGACGAA GTGGATCGAC CCCGCTACGG GGGAGTCGCG CTACCGGTTT
ACGTATGATG CCGCTAATAT GTTCGACTTC CAGGAGGCTA TCCGCTGGGC ACCACAGGCG
GGTACAATGG ATAACGGAGC GACTTATCGG CGATTATTTT ACCAGCTCAA ACTGAATTAC
AACAGGACCT GGAATAAGCA CACGGGCTCG GCTATGGGGC TGTTCAGCCG CGAAGACCGG
GCGTCGGGCA GCGAGATTCC CAATTATCGG GAAGACTGGG TGTTCCGTAC CACCTACGAT
TATGCCGGTA AGTACTTCGC CGAAGTCAAC GGGGCCTATA ACGGTTCCGA AAAGTTTGGT
AAAGACAACC GCTTTCACTT TTTCTCGTCG GGTGCGGTGG GCTGGCTGCT ATCGGAAGAG
GCATTTTTCA AGCGGGCCAA GTTTCTGGAT CTGCTCAAGC TGCGGGTGTC CTACGGAAAG
ATCGGTGATG ACAACATCAA CCAGCGATGG CTCTATATGA CTCAGTGGGG ATATGACGGC
CAGGCAAAAA TAGGCGAGAA CAACTCGGAT GTCAGCCCCT ATGTCTGGTA TCGGGAGTCC
TCGGTGGGTA ACCCGTCGGT ACACTGGGAA ACGGTAACGA AAACGAACCT GGGAGCCGAT
TTCTCCCTGT TCAACGGGAC TATTTCGGGT AGTGCGGATT ACTTCAACGA CTACCGCACG
GATATTCTCA TTGCTGGTGG GTCGCGGGCT ATTCCGTCTT ACTATGGCAC CAATGCCCCC
GTTGCCAACC TGGGTAAAGT GCGGGTGAAA GGCTATGAGC TGGAAGTAAA GGTAAACCAT
CAGCTGACCA ACGGCATCCG GCTCTGGGCC AACGCAAACA TGACCCATGC CAAAGACCGG
ATCATTGAAG CGGATAACCC AAGCCTGCTG CCCGACTACC GCAAGAGCGA GGGCAAGCAG
ATCGGACAGA CCTATTCGTA CGTTAGCCAC GGCTACTACA ACAACTGGGA TGAGCTGTAT
GGCAGCACCG AACAGAACAC CAACGACCGG CAAAAGCTGC CGGGTAACTT CCAGATCGTT
GATTATAACG GCGATGGCAA GATCGACACT TACGACAATA TCCCATATGG TTTCCCCGAG
CGTCCGCAGA ATACTTACAA CGGTACGGTT GGTTTTGAGT GGAAAGGATT CAGCGCCTTC
GCGCAGTTTT ATGGCGTCAA TAACGTAACC CGTCAGGTGG TGTTCACCAG CTTTGGCTCC
CGAATGAACA CTGTTTATAA CCAGGGCGAG TACTGGACGA AAGACAATCC AACGGCGAAT
TCACCTCTGC CCCGTCTGAT GACGGCCACC GACCCATCGA CCTACGGCAA CTTCTATATG
TACGATGGCT CCTACGTGCG CCTGAAGAAC GCCGAGGTCG CCTACACCTT CAACCGGGGC
TGGATCGAAC GGTTCGGGCT GCGCACGCTG CGAATCTACG CCAACGGGAA CAACCTCTGG
CTCTGGACCA AAATGCCCGA CGACCGCGAA TCGAATTTCG CGGGTACGGG CTGGGCCGCC
CAGGGCGCTT ACCCGACAGT GAAGCGGTAC AATTTCGGCA TCAACATTAC CCTGTAA
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| Protein sequence | MNVTRFVGFW IVWTCFLLSS QPVLAQESHT VKGLVLDENQ KPLFGAYVIL KNTTTGTTTD
VNGEFALKVP AGKQTLAISY LGSKPQDITV EKGGNVKVVL SGGDITLGET VVVGYAQQKK
QSVVGAISQT TGKVLERAGG VYSVGSALTG NVPGVITTSS TGMPGEEDPR ILIRGLSSWN
NSSPLILVDG IERPMNSVDI SSIETISVLK DASATAVFGV KGANGVILIT TKRGKEGKAN
ISIRADYTLK APSTLPNKYD AYDARRIRNQ VIENELGLES AGWATYTPYD ILTKYRNPAN
LAEAERYPNV NWAKEMFKPV TQTYSANLNV SGGTSFVKYF ASADFLMDGD IFKEWDNNRG
YQAGYGFNRI NVRTNLDFQL TPTTLLVTNL SSSNGVKKSP WGATGGEYDM WQGAYGVAPD
AMLPRYSDGT WGYYAQDPVA ATNSILNLAR SGIMKRTTSR ITTDFTLNQD LKSIAKGLST
SGTISWDNSF VESQRGINDL YNDPQTKWID PATGESRYRF TYDAANMFDF QEAIRWAPQA
GTMDNGATYR RLFYQLKLNY NRTWNKHTGS AMGLFSREDR ASGSEIPNYR EDWVFRTTYD
YAGKYFAEVN GAYNGSEKFG KDNRFHFFSS GAVGWLLSEE AFFKRAKFLD LLKLRVSYGK
IGDDNINQRW LYMTQWGYDG QAKIGENNSD VSPYVWYRES SVGNPSVHWE TVTKTNLGAD
FSLFNGTISG SADYFNDYRT DILIAGGSRA IPSYYGTNAP VANLGKVRVK GYELEVKVNH
QLTNGIRLWA NANMTHAKDR IIEADNPSLL PDYRKSEGKQ IGQTYSYVSH GYYNNWDELY
GSTEQNTNDR QKLPGNFQIV DYNGDGKIDT YDNIPYGFPE RPQNTYNGTV GFEWKGFSAF
AQFYGVNNVT RQVVFTSFGS RMNTVYNQGE YWTKDNPTAN SPLPRLMTAT DPSTYGNFYM
YDGSYVRLKN AEVAYTFNRG WIERFGLRTL RIYANGNNLW LWTKMPDDRE SNFAGTGWAA
QGAYPTVKRY NFGINITL
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