Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2090 |
Symbol | |
ID | 8725828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 2521459 |
End bp | 2522547 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003386928 |
Protein GI | 284036998 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0316441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.866168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCTT CCCCGCGTAA AGACCCGTAT TTTGCAGGCG CTAGACTGGA GGCTATGCAA AAACTACACG ACCGCTGGTT TCGGATGCTG GGTATCCCGC TGCTGTCGTT TTTTGGCGAC TGGATTTTCT ATGATGAAAT CAACCGACAG CATGGGCAGT CGTTCTGGCT GGATTATCTC ATCAGTCTGA TTGAGGTTTC GCTGCTGTGG ACACTGGTGC GGGTCGTGAT CATCAAAGCC CGAAAACGTT ATCCTGACCT CAAACAAACG CGCCAGCGCA TTCTGTATCA GGCAGGATGG TTTCTGGTCA TTACCGGTAT ATACCGGGTT TGTACCAGCC TGTTATACGA TGTTACGTTC TTCTGGGGGT ACCACTATAC CCCCCTGCGG TACGTGTATA ACATCGCCGT CGGGTTTTTC TGCGCCCTGC CAGTGGCCGC TATCTACGAA GGGATTTACC TGTACCGGCA ATGGATGGTG ACCTATTTCG AAGCCGAGGA ATTGAAGAAG CGTAACCTGC AAACCCAGTT GGAATCCTTA AAGGAACAGG TGAAACCCCA CTTTCTGTTC AATTGCCTCA ACACGTTACA GGCCCTGGTC ATTGAAGAAG AAAAACAACG GACGCTGGAC TTTATCACTG ATCTGGCTCA GGTATACCGA TATCTGCTAC AGAGCAATCA TCAATCGCTT ATTTCGCTGC ACAAGGAGCT GGAGTTTATC CGGGCGTTCG TGGAATTATT ACAACATCGT TTCGAAGGTG GATTCCGCCT GGAGATTGAC ATTCCTGAAC ATTACCTCGA CCATCAGTTG CCCCCGTTAA CCTTGCAGAT ACTGGTGGAA AATGCCGTTA AGCATAATCG GATATCGGTT GCACACCCGC TGACAATCAA ACTCTATAGC GATTCCACCG GTAACCTGGT TGTGGTTAAC AACCGGCAGC CAAAACGAAC ACGAGTAGCT TCCAACGGAA CCGGACTGGC CAATATATCG GCAAAATATC GCCTGCTGAA TCAGTCAGAT ATTATCATTT ATGAAAGTAA CACCCATTTT CAGGTATCCA TCCCGCTGCT TAAACCAGTT CTCCTATGA
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Protein sequence | MIASPRKDPY FAGARLEAMQ KLHDRWFRML GIPLLSFFGD WIFYDEINRQ HGQSFWLDYL ISLIEVSLLW TLVRVVIIKA RKRYPDLKQT RQRILYQAGW FLVITGIYRV CTSLLYDVTF FWGYHYTPLR YVYNIAVGFF CALPVAAIYE GIYLYRQWMV TYFEAEELKK RNLQTQLESL KEQVKPHFLF NCLNTLQALV IEEEKQRTLD FITDLAQVYR YLLQSNHQSL ISLHKELEFI RAFVELLQHR FEGGFRLEID IPEHYLDHQL PPLTLQILVE NAVKHNRISV AHPLTIKLYS DSTGNLVVVN NRQPKRTRVA SNGTGLANIS AKYRLLNQSD IIIYESNTHF QVSIPLLKPV LL
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