Gene Slin_2087 details

Gene Information

• Locus tag: Slin_2087
• ID: 8725825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: -
• Start bp: 2516823
• End bp: 2518997
• Gene Length: 2175 bp
• Protein Length: 724 aa
• Translation table: 11
• GC content: 40%
• Product: DNA/RNA non-specific endonuclease
• Protein accession: YP_003386925
• Protein GI: 284036995

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.29894
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTACTAG CAGTTGATCA ACTTAAAGAA TCGGAACATA GGTATGACGT AATCGCAGCA 
CTGCCTACGC GAGATGCCGT GTCCGATTTT AACGAAGCTA CGTTTGTTCA GGATATTGCC 
CCGGTAATTA CAAAAGGCAA TATTTTAGGC ACAGACGAGA ATCTGGCGAA ACGAAAAGAA 
ATGCTGGAAG AGGTTGGGCG AGAACCTGTT GATTTCGCGT TTGAGCGGGC TATTGGTAAA 
AATGATTCCG TTTATAGCAA CTTTATTGGA TTGATAGGAG ACGCCAAACG AAGAGTTGGT 
CGCATTGCCA TAAAAAAAGG GATTAAACCA GTTGGTTTCG CCACTGGCTT TATGGTATCT 
GAACAATTAA TGCTTACAAA TTGGCATGTC TTTCCATCGA TCAATGATGT AGCGGATAGT 
GAAATACAAT TTTTTTATGA ACTAGATACT CTAGGAAATC CCGGCACATC TACCTGTTTC 
AAACTCAGAA GTGACATTTT TTATCACGCA AGTAAAGAAT TGGACTACTG CTTTGTAGCA 
GTAAACCCAA TGGATACGGA CAACAAAGTG AAATTAGTGG ATATAGGGTA TATTTTTCTT 
GATCCTGGCC TAGGTAAATT AGGTAATGAA GAAGAAGAGG CCTTAAACAT TATTCATCAT 
CCGAACGGGG ATTACATGCA GCTATCGATA CGCGAAAACC TGTTCGTTAA AATCACGCCA 
GTATCTATAT GGTATAAAAC AGATACCGCC CCAGGTAGTA GCGGTAGTCC GGTATTTAAT 
GATCAATGGC AGGTCGTAGC CCTGCATCAC ATGGGCATAG GCAAAAAAAA TGCATCCGGT 
GATTACATCG ATAAAGATGG AAACGTTATT CCTAAAATTA ACGGCAAAAT TAAGGCGTCA 
CAGGTTGTAT GGGAGGCCAA CGAAGGCATG CGGATCAGTG TCATTCTTAA TGATCTATTT 
AGTTCTTTTC CAGATACTCC ACTAACCAAC GGGCTAAAAA GAAGACCTGG CAGCAAAACT 
TCCATCATCG AAGGTCAACA AATGCTAGGA CCAGAAAAAT CGGTCAACCC TTTACCTCCC 
CACTCTGATA TGGAAGCACT TAACTCAAAC AGCGCCAATG TGAACATTTC CTTTCCGGCT 
TCTTTAATTG AAAAGAATGG TACCCTTACT ATTAATATAA ATCAAGGTTC AAACAATACA 
CCCACTCGGC CAGCACAGAA AGTAACGACT TTGACTGCAA TTGAGGAAGT AGATAGTTTA 
GAAACTAAAA AGCTGGAGGA GTCACTAGAT TTATCCGGTT GCAAAGGATA TCAATCCAGA 
TTTTTGGGTA GCAGATTCGA TATACCTTTA CCTCAGCCAC AAAACGAAAT AAAAAAGTTT 
ATAGCCAAAA TTAACGGCAC AGACAGCGCA GTATTAAAAT ACTATAACTA TAGTACTATT 
TTTCATGCTG TCCGGATGAT GCCTATCCTT AGTGGTATAA ATGTGAATGG AGACCTTGCT 
CAGCGGTTAG ACAATACCGA ACGAAAAGAC ATCTGGCTGC GTGATAACCG ACTTAGCTTT 
GACATTCAGC TTGATGATAG CTATTATAAA AAAAGTGGTT TTGACCGGGG GCATATGAGC 
CGCCGGGAAG ATGCAAACTG GGGGTCTACA GCTGACGATG CAAAGCGCAA TGCCGATCTT 
ACCTGTATGT ATACAAATGC TTGCCCTCAA GTGGCTAAGC TCAACCAGAG TAGCAAAAAA 
GGCCTGTGGG GCCTTTTAGA AAAAATAGTT CTGGAGAGTG GGGCAAAAGT TGAAAAAGGC 
GAAATGGCCA GGATATCTGT ATTCAACGGG CCTATATTTA AGGATTCAGA TCCCGTGTTC 
AAAGGCATTC AGGTGCCTAT GAGTTTTTAT AAAATTATAC TCTGGTTAAC TAAAAATGGA 
AATTTAAAAG CAACAGCGTT CAAATTATCT CAGGAAGAAT TGGTTGACGA AATTGATTTT 
GAACAATTAG ACCTGGATCA AAACCTTGAG TTTAAAGAAT ACCAATGTAG CATCAGGTCA 
TTACATGAAA GTACGAAAAT AGACTTTTCG AGCCTTTTCA GCTTTGACAC ATTTAAAGAC 
CTAACTAGCA ACGAAGCCAC TATAAACTCG ACTTTTGAGG TTATGAGTCA TATAGATAAG 
TTCATTAATG AATAA 

 

Protein sequence

MLLAVDQLKE SEHRYDVIAA LPTRDAVSDF NEATFVQDIA PVITKGNILG TDENLAKRKE 
MLEEVGREPV DFAFERAIGK NDSVYSNFIG LIGDAKRRVG RIAIKKGIKP VGFATGFMVS 
EQLMLTNWHV FPSINDVADS EIQFFYELDT LGNPGTSTCF KLRSDIFYHA SKELDYCFVA 
VNPMDTDNKV KLVDIGYIFL DPGLGKLGNE EEEALNIIHH PNGDYMQLSI RENLFVKITP 
VSIWYKTDTA PGSSGSPVFN DQWQVVALHH MGIGKKNASG DYIDKDGNVI PKINGKIKAS 
QVVWEANEGM RISVILNDLF SSFPDTPLTN GLKRRPGSKT SIIEGQQMLG PEKSVNPLPP 
HSDMEALNSN SANVNISFPA SLIEKNGTLT ININQGSNNT PTRPAQKVTT LTAIEEVDSL 
ETKKLEESLD LSGCKGYQSR FLGSRFDIPL PQPQNEIKKF IAKINGTDSA VLKYYNYSTI 
FHAVRMMPIL SGINVNGDLA QRLDNTERKD IWLRDNRLSF DIQLDDSYYK KSGFDRGHMS 
RREDANWGST ADDAKRNADL TCMYTNACPQ VAKLNQSSKK GLWGLLEKIV LESGAKVEKG 
EMARISVFNG PIFKDSDPVF KGIQVPMSFY KIILWLTKNG NLKATAFKLS QEELVDEIDF 
EQLDLDQNLE FKEYQCSIRS LHESTKIDFS SLFSFDTFKD LTSNEATINS TFEVMSHIDK 
FINE