Gene Slin_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2069 
Symbol 
ID8725807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2498774 
End bp2499262 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003386909 
Protein GI284036979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTAC ACGAGGAGGA ATTCACTCAA ATCTATAATA CCCATTTTGT GAAGGTCTTG 
CGTCTTTGCA AAGGCTATGT AAATGGCGAT CAGGCCATCG CAACGGATCT GGCGCAAGAG
GTATTTATGA AAGTATGGCA ACATCGAAGC CAATTTAGAC AGGAGGCTTC GGTCAGTACC
TGGATTTACA GGATAGCGGT TAATACGCGT CTGCTACAGC GCCGGAAGGC TGCTGCCAAT
AAGGAAGTTC AAACGGACAC TCTTCCTGAG AGAGCTGAAG ATAACGATGC ATTGGCGACC
GAGGAGCGAT TTCAGCAAAT GTATCGTGGA ATTTACCAAC TCAACGAGAC CGCTCGCTTA
ATTATCTTAC TGGTATTGGA TGGGCTGCCC TACGAAGAAA TTGCTGGTAT TGTTGGTATT
TCAGAAAGTT TGCTGCGAGT AAAAATTCAC CGAATCAAAA AAAGCCTAGC TACCTTGATC
CAGTCATGA
 
Protein sequence
MPLHEEEFTQ IYNTHFVKVL RLCKGYVNGD QAIATDLAQE VFMKVWQHRS QFRQEASVST 
WIYRIAVNTR LLQRRKAAAN KEVQTDTLPE RAEDNDALAT EERFQQMYRG IYQLNETARL
IILLVLDGLP YEEIAGIVGI SESLLRVKIH RIKKSLATLI QS