Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2064 |
Symbol | |
ID | 8725802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2492363 |
End bp | 2494171 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003386905 |
Protein GI | 284036975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.246858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACATT CGTTTGATAC TTTTAAGGCC CGCATGCGAA TCGACTTCAG CGTGATCATC GCCGGCTTTT TACTCCTGCT TGGCTTACTG CTATTGGGCT ATCAGCAGGT TCGGCAAGAT GCAAACAGCC AGTGGGTAGA GCATACCTAT CAGGTCATTG ACCAATTAAA GGCCGTGGAG GCTTTGTTGG TCGATGCCGA GACGGGTGCC CGGGGCTTCG CGGCTACCCG GGATAGGGTG TTTCTTGAAC CCTACCGACA AGCCAGGCCC CGGATTGACA GCAACTTAGA GGCCCTGCCC AAACTGGTGG CCGATAACCC CGCTCAGCAA CGGCGAGCCA GACAATTAGA CCAGCTGGCG AAGGCCAAAG TAGCCATTGT CGATCAACTC GTTCGAACTA TCCCTTCGCC AGCAGCGGAC GCGCTACTGA AACAGGGGAA ACAGCGTATG GACGCCGTAC GCCGTCAGGT GAGGGCCATG ATTGCCGTAG AGCAGGCCTT ACTCAAGACC CGCCAGCAGC GGACCCTGAC TGCCAACCGC TACACCATGG GGTTGATCGC CTTGCTCTTA GCGCTGGCCC TGCTGGCTTT CTGGCAGGCC TCTGGGATCA TTCAGCAGGA ACTTACCCAG CGGCTAGAGG TCCAGCGGGC AACTCGTCAA ACCGCCGAAC TGCTCCAGAG TATCATTCGG AATGTGCCGA CCGGCCTGGT CGTTTATCAG GCCGTCCGAG ACTTGGATGG CCAGATTGTC GACTTCATCT ATACCTTATC CAACCCCGTC AACGATCAGG TGGCGGGCCG TCAGGCGGGT GAACTCCTGC AGGTATCGCT CTTGACCCAC GCACCGGTTA CCCGCACCAA TGGGATCTAT GCCGATCTGG TTCAAGTGGT TACCAGCGGT CAGCCGCTCT ACCGCATACG GCACTTCCAA TCGGATCGCG TTCAGGGTTG GTTTGATAGC CGCTACGTCA AACAGGGAGA TGGGGTACTG GTGAGTTTCC TGGATGTAAC GGCTCTCAAG GAAGCCGAGC TGACGCAGCA GCAGCAGGCT CTGGCACTTC AACGTGCTAA TCAGGAATTG CAACGTTCCA ACGACAGCCT GCAATCGTTT GCCTTTGTCG CCAGCCATGA TTTACAGGAG CCCTTGCGTA AAATTGAGTC GTTCAGCACG CTGCTTATGG GTCAGTACTC CCATAAGTTG GATGAGCATG CAGCCGACTA CCTGCGACGA ATGCAGTCAG CCGCCAGTCG AATGTCCACA CTGATTCGGG ATTTACTGGC CTATTCGCGG ATTTCCACCC AGCCAGATGC AACAAACGCT GTGCCGCTCA CACTGGTAGC CCGGCAAGCG GCCACTGACT TAGACCTTCT TATTGACGAA ACCCGGGCCA TCATCCGAAT TGATCCCCTC CCTACGGTAC TGGGCGACGC GTCTCAATTG GGGCAGCTGT TTCTGAATCT GCTGGCTAAT GCCCTCAAGT TTCGCCGGAC CGGGGTGGTT CCCCAGATTG AGATTCAATC GCACCCGGTC CCAGCATCTG AATTGCCATC CTCGGTAAAA CCCGCCCGGA TGGCGGCCAC CTACCATCGC ATCGATGTAG CCGACAATGG AATCGGATTT GAGGAGCAGT ATGTCGACCG CATTTTTCAG GTCTTCCAGC GGTTGCACAG CAAGAGTGCC TATGCAGGTA CGGGGATTGG CCTGGCCATT TGTGAGAAGG TGGTCAGCAA TCATGGAGGA GCTATAACGG CCACTAGTCA ACCTGGTCAG GGGGCCACCT TTAGCATCTA TCTACCTGCG AATGAGTAG
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Protein sequence | MPHSFDTFKA RMRIDFSVII AGFLLLLGLL LLGYQQVRQD ANSQWVEHTY QVIDQLKAVE ALLVDAETGA RGFAATRDRV FLEPYRQARP RIDSNLEALP KLVADNPAQQ RRARQLDQLA KAKVAIVDQL VRTIPSPAAD ALLKQGKQRM DAVRRQVRAM IAVEQALLKT RQQRTLTANR YTMGLIALLL ALALLAFWQA SGIIQQELTQ RLEVQRATRQ TAELLQSIIR NVPTGLVVYQ AVRDLDGQIV DFIYTLSNPV NDQVAGRQAG ELLQVSLLTH APVTRTNGIY ADLVQVVTSG QPLYRIRHFQ SDRVQGWFDS RYVKQGDGVL VSFLDVTALK EAELTQQQQA LALQRANQEL QRSNDSLQSF AFVASHDLQE PLRKIESFST LLMGQYSHKL DEHAADYLRR MQSAASRMST LIRDLLAYSR ISTQPDATNA VPLTLVARQA ATDLDLLIDE TRAIIRIDPL PTVLGDASQL GQLFLNLLAN ALKFRRTGVV PQIEIQSHPV PASELPSSVK PARMAATYHR IDVADNGIGF EEQYVDRIFQ VFQRLHSKSA YAGTGIGLAI CEKVVSNHGG AITATSQPGQ GATFSIYLPA NE
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