| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2064 |
|---|
| Symbol | |
|---|
| ID | 8725802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2492363 |
|---|
| End bp | 2494171 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003386905 |
|---|
| Protein GI | 284036975 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.246858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACATT CGTTTGATAC TTTTAAGGCC CGCATGCGAA TCGACTTCAG CGTGATCATC
GCCGGCTTTT TACTCCTGCT TGGCTTACTG CTATTGGGCT ATCAGCAGGT TCGGCAAGAT
GCAAACAGCC AGTGGGTAGA GCATACCTAT CAGGTCATTG ACCAATTAAA GGCCGTGGAG
GCTTTGTTGG TCGATGCCGA GACGGGTGCC CGGGGCTTCG CGGCTACCCG GGATAGGGTG
TTTCTTGAAC CCTACCGACA AGCCAGGCCC CGGATTGACA GCAACTTAGA GGCCCTGCCC
AAACTGGTGG CCGATAACCC CGCTCAGCAA CGGCGAGCCA GACAATTAGA CCAGCTGGCG
AAGGCCAAAG TAGCCATTGT CGATCAACTC GTTCGAACTA TCCCTTCGCC AGCAGCGGAC
GCGCTACTGA AACAGGGGAA ACAGCGTATG GACGCCGTAC GCCGTCAGGT GAGGGCCATG
ATTGCCGTAG AGCAGGCCTT ACTCAAGACC CGCCAGCAGC GGACCCTGAC TGCCAACCGC
TACACCATGG GGTTGATCGC CTTGCTCTTA GCGCTGGCCC TGCTGGCTTT CTGGCAGGCC
TCTGGGATCA TTCAGCAGGA ACTTACCCAG CGGCTAGAGG TCCAGCGGGC AACTCGTCAA
ACCGCCGAAC TGCTCCAGAG TATCATTCGG AATGTGCCGA CCGGCCTGGT CGTTTATCAG
GCCGTCCGAG ACTTGGATGG CCAGATTGTC GACTTCATCT ATACCTTATC CAACCCCGTC
AACGATCAGG TGGCGGGCCG TCAGGCGGGT GAACTCCTGC AGGTATCGCT CTTGACCCAC
GCACCGGTTA CCCGCACCAA TGGGATCTAT GCCGATCTGG TTCAAGTGGT TACCAGCGGT
CAGCCGCTCT ACCGCATACG GCACTTCCAA TCGGATCGCG TTCAGGGTTG GTTTGATAGC
CGCTACGTCA AACAGGGAGA TGGGGTACTG GTGAGTTTCC TGGATGTAAC GGCTCTCAAG
GAAGCCGAGC TGACGCAGCA GCAGCAGGCT CTGGCACTTC AACGTGCTAA TCAGGAATTG
CAACGTTCCA ACGACAGCCT GCAATCGTTT GCCTTTGTCG CCAGCCATGA TTTACAGGAG
CCCTTGCGTA AAATTGAGTC GTTCAGCACG CTGCTTATGG GTCAGTACTC CCATAAGTTG
GATGAGCATG CAGCCGACTA CCTGCGACGA ATGCAGTCAG CCGCCAGTCG AATGTCCACA
CTGATTCGGG ATTTACTGGC CTATTCGCGG ATTTCCACCC AGCCAGATGC AACAAACGCT
GTGCCGCTCA CACTGGTAGC CCGGCAAGCG GCCACTGACT TAGACCTTCT TATTGACGAA
ACCCGGGCCA TCATCCGAAT TGATCCCCTC CCTACGGTAC TGGGCGACGC GTCTCAATTG
GGGCAGCTGT TTCTGAATCT GCTGGCTAAT GCCCTCAAGT TTCGCCGGAC CGGGGTGGTT
CCCCAGATTG AGATTCAATC GCACCCGGTC CCAGCATCTG AATTGCCATC CTCGGTAAAA
CCCGCCCGGA TGGCGGCCAC CTACCATCGC ATCGATGTAG CCGACAATGG AATCGGATTT
GAGGAGCAGT ATGTCGACCG CATTTTTCAG GTCTTCCAGC GGTTGCACAG CAAGAGTGCC
TATGCAGGTA CGGGGATTGG CCTGGCCATT TGTGAGAAGG TGGTCAGCAA TCATGGAGGA
GCTATAACGG CCACTAGTCA ACCTGGTCAG GGGGCCACCT TTAGCATCTA TCTACCTGCG
AATGAGTAG
|
|---|
| Protein sequence | MPHSFDTFKA RMRIDFSVII AGFLLLLGLL LLGYQQVRQD ANSQWVEHTY QVIDQLKAVE
ALLVDAETGA RGFAATRDRV FLEPYRQARP RIDSNLEALP KLVADNPAQQ RRARQLDQLA
KAKVAIVDQL VRTIPSPAAD ALLKQGKQRM DAVRRQVRAM IAVEQALLKT RQQRTLTANR
YTMGLIALLL ALALLAFWQA SGIIQQELTQ RLEVQRATRQ TAELLQSIIR NVPTGLVVYQ
AVRDLDGQIV DFIYTLSNPV NDQVAGRQAG ELLQVSLLTH APVTRTNGIY ADLVQVVTSG
QPLYRIRHFQ SDRVQGWFDS RYVKQGDGVL VSFLDVTALK EAELTQQQQA LALQRANQEL
QRSNDSLQSF AFVASHDLQE PLRKIESFST LLMGQYSHKL DEHAADYLRR MQSAASRMST
LIRDLLAYSR ISTQPDATNA VPLTLVARQA ATDLDLLIDE TRAIIRIDPL PTVLGDASQL
GQLFLNLLAN ALKFRRTGVV PQIEIQSHPV PASELPSSVK PARMAATYHR IDVADNGIGF
EEQYVDRIFQ VFQRLHSKSA YAGTGIGLAI CEKVVSNHGG AITATSQPGQ GATFSIYLPA
NE
|
|---|
| |