Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2058 |
Symbol | |
ID | 8725796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 2488052 |
End bp | 2488462 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003386900 |
Protein GI | 284036970 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.564718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTGC TAAAACAGCG TTCTACTTGC CCCATCAGCA CATCGCTCGA CGTGTTGGGG GACAAATGGA CCCTGCTCAT TCTGCGGGAT ATGGTGTTCG CGGGGAAGTC TACTTATGGC CAATTTCTAC AGTCAGCGGA GAAAATGGCG ACCAACGTTC TGGCTGACCG TCTGGCTGTC CTGGAGTCGC AAGGTCTTTT AACCAAGGCA GTGGCCTCCG ATAAAAAATC GAAGTTCACC TACCGCCTGA CAGAAAAAGG TGTTGATACT ATCCCCATTA TTATAGAGCT CATTCTGTGG GGAACTAAGC ATTGCCCCGC CGTCGTCGAC CCTTGCTTGC TGGAAGAACT ACAGGTTAGG AAAGAGGCAG CCATTGAGAA GTACCAACGG CTCGCCCGCG AAAAGCGGTG A
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Protein sequence | MKVLKQRSTC PISTSLDVLG DKWTLLILRD MVFAGKSTYG QFLQSAEKMA TNVLADRLAV LESQGLLTKA VASDKKSKFT YRLTEKGVDT IPIIIELILW GTKHCPAVVD PCLLEELQVR KEAAIEKYQR LAREKR
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