Gene Slin_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2058 
Symbol 
ID8725796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2488052 
End bp2488462 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content52% 
IMG OID 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003386900 
Protein GI284036970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.564718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGC TAAAACAGCG TTCTACTTGC CCCATCAGCA CATCGCTCGA CGTGTTGGGG 
GACAAATGGA CCCTGCTCAT TCTGCGGGAT ATGGTGTTCG CGGGGAAGTC TACTTATGGC
CAATTTCTAC AGTCAGCGGA GAAAATGGCG ACCAACGTTC TGGCTGACCG TCTGGCTGTC
CTGGAGTCGC AAGGTCTTTT AACCAAGGCA GTGGCCTCCG ATAAAAAATC GAAGTTCACC
TACCGCCTGA CAGAAAAAGG TGTTGATACT ATCCCCATTA TTATAGAGCT CATTCTGTGG
GGAACTAAGC ATTGCCCCGC CGTCGTCGAC CCTTGCTTGC TGGAAGAACT ACAGGTTAGG
AAAGAGGCAG CCATTGAGAA GTACCAACGG CTCGCCCGCG AAAAGCGGTG A
 
Protein sequence
MKVLKQRSTC PISTSLDVLG DKWTLLILRD MVFAGKSTYG QFLQSAEKMA TNVLADRLAV 
LESQGLLTKA VASDKKSKFT YRLTEKGVDT IPIIIELILW GTKHCPAVVD PCLLEELQVR
KEAAIEKYQR LAREKR