Gene Slin_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2052 
Symbol 
ID8725790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2484114 
End bp2484914 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_003386896 
Protein GI284036966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.754921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCT GTCGCAAAAT TTATTCACTC ATTCACTCAT TCACTCATTA TAGTATGAAA 
CTCACTCTCG TCGGAGCCGG ACCAGGCGAT CCGGACTTGA TAACGGTAAA GGGAATCAAG
GCATTAAAGC AGGCCGATGT GGTCATGTAC GATGCCCTGG TCCATTCCGA TTTGCTGGAT
TACTGCCGCC CCGATGCCCT TAAAGTATAT GTGGGAAAAC GGCGGGGGGC TTACTCATGC
ATGCAGGAGG ATATTAACCC GCTGATCGTA CATTATGCTC AGCAGTACGG GCATGTGGTA
CGGTTGAAAG GAGGTGACTC GTTCGTATTT GGCCGCGGGT TTGAAGAAAT CGAGTTTGCC
CGCCAGCATG GCATTGAGAC ACAGGTGATC CCCGGCTTGT CGAGTAGTTA TTCGGTACCG
GCCTCGGCCA ATATTCCGCT TACCACGCGG GGGGTATCAG AAAGTTTTTG GGTGGTTACG
GGCACCACGA AAGCCGGACA GCTTTCCAGT GACCTTAATC TGGCTGCCCA GTCGACAGCT
ACCGTCGTTA TCTTAATGGG TATGCACAAA CTGGCTGATA TCATGACTGT TTTTGCGCAG
CATGGCAAAA GTGATACCCC GGTCGCCATT ATCCAGAACG GCACCCTCCC CGACCAGCAA
ATGGTTGTTG GGTGTGTTCA GGATATAATT GAAAAAGTAA ACGAATCGGG CGTCGGTAAC
CCGGCCATTA TCGTCGTCGG CGAAGTAGCC GGGCTTAAAT TGACTGAGGT TCAGGCTATC
GCAGCAGTGA ATCAGGTATA A
 
Protein sequence
MIRCRKIYSL IHSFTHYSMK LTLVGAGPGD PDLITVKGIK ALKQADVVMY DALVHSDLLD 
YCRPDALKVY VGKRRGAYSC MQEDINPLIV HYAQQYGHVV RLKGGDSFVF GRGFEEIEFA
RQHGIETQVI PGLSSSYSVP ASANIPLTTR GVSESFWVVT GTTKAGQLSS DLNLAAQSTA
TVVILMGMHK LADIMTVFAQ HGKSDTPVAI IQNGTLPDQQ MVVGCVQDII EKVNESGVGN
PAIIVVGEVA GLKLTEVQAI AAVNQV