| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2050 |
|---|
| Symbol | |
|---|
| ID | 8725788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 2481083 |
|---|
| End bp | 2481502 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | Insertion element protein |
|---|
| Protein accession | YP_003386894 |
|---|
| Protein GI | 284036964 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.791087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACGT TAAAATGTCC GAAATGTAAT TCGGTAGATG CAGTCCGAAA TGGTATTGTT
AATCAGCGTC AGCGTTTTCG GTGCAAGAAA TGCAACTACA ATTTTACCGT TGGTAAAGTT
GGTAAAGGTA TCAGCACCTA TTACGTCATC AAAGCCTTAC AGCTTTATAT TGAGGGGGTT
AGCTTTCGTG AAATCGAACG ATTACTTGGC ATCAGCCATG TGTCGGTTAT GAACTGGGTC
AAGAAATACC AGATTAAAAT CCCTGAGAAC AACACGTATC ATCCGACGTA TAAAATTCTT
AATCACAGAG AGTTAGTAGA ATTTTATTCG GATCGGAAAA ACACGGAAGG GGCGGGGATG
ATCGTAACCG AACTGGGCGA TAAATTTATG CTCATTAAGT GGGAGCGTTT TAAGGAATAA
|
|---|
| Protein sequence | MATLKCPKCN SVDAVRNGIV NQRQRFRCKK CNYNFTVGKV GKGISTYYVI KALQLYIEGV
SFREIERLLG ISHVSVMNWV KKYQIKIPEN NTYHPTYKIL NHRELVEFYS DRKNTEGAGM
IVTELGDKFM LIKWERFKE
|
|---|
| |